CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plastid, vacuole
Any Predictor:	endoplasmic reticulum, extracellular, plastid, vacuole
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033670.1	Barley	vacuole	82.67	36.26
TraesCS7A01G164200.1	Wheat	vacuole	82.67	35.43
TraesCS7D01G492900.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.67	35.43
TraesCS7B01G488700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.67	35.43
TraesCS7B01G488300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.67	35.43
TraesCS3B01G189600.1	Wheat	vacuole	82.67	35.43
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.67	35.43
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.33	35.06
TraesCS4A01G171000.1	Wheat	vacuole	81.33	34.86
TraesCS2D01G564600.1	Wheat	vacuole	81.33	34.86
TraesCS5A01G020600.1	Wheat	vacuole	81.33	34.86
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	81.33	34.86
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.33	34.86
TraesCS1B01G068900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	80.0	34.29
TraesCS3B01G363700.1	Wheat	vacuole	80.0	34.29
TraesCS4A01G069700.1	Wheat	vacuole	80.0	34.29
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	76.0	32.57
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	77.33	32.04
KRH33086	Soybean	plasma membrane	84.0	26.25
ATMG00580.1	Thale cress	plasma membrane	89.33	13.54
GRMZM5G804358_P02	Maize	plasma membrane	78.67	11.92
BAC19875	Rice	plasma membrane	77.33	11.72
Solyc10g045750.1.1	Tomato	extracellular	6.67	5.15
HORVU5Hr1G079280.1	Barley	extracellular	4.0	4.17
CDY45493	Canola	extracellular	1.33	1.56
OQU86913	Sorghum	extracellular	1.33	1.09
HORVU5Hr1G079270.1	Barley	extracellular	1.33	1.09
VIT_00s0629g00020.t01	Wine grape	mitochondrion	0.0	0.0

Protein Annotations

MapMan:35.1	GO:A0A078I7V0	UniProt:A0A078I7V0	EnsemblPlants:CDY45494	ProteinID:CDY45494	ProteinID:CDY45494.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00082152001	InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix	UniParc:UPI0004EF0CE0

Description

BnaCnng12530DBnaCnng12530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7V0]

Coordinates

chrLK032627:-:53341..53623

Molecular Weight (calculated)

8328.3 Da

IEP (calculated)

8.329

GRAVY (calculated)

0.576

Length

75 amino acids

Sequence
(BLAST)

1: MLEHFCECYS NLSGLILCPV LGSITPLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFTV SLYSS

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.