CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	26.25	84.0
HORVU0Hr1G033670.1	Barley	vacuole	59.58	83.63
TraesCS7D01G492900.1	Wheat	cytosol, endoplasmic reticulum, vacuole	59.58	81.71
TraesCS7B01G488700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	59.58	81.71
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	59.58	81.71
TraesCS5A01G020600.1	Wheat	vacuole	59.58	81.71
TraesCS7B01G488300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	59.17	81.14
TraesCS3B01G363700.1	Wheat	vacuole	59.17	81.14
TraesCS2D01G564600.1	Wheat	vacuole	59.17	81.14
TraesCS7A01G164200.1	Wheat	vacuole	58.75	80.57
TraesCS4A01G171000.1	Wheat	vacuole	58.75	80.57
TraesCS4A01G069700.1	Wheat	vacuole	58.75	80.57
TraesCS3B01G189600.1	Wheat	vacuole	58.75	80.57
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.75	80.57
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.92	79.89
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	57.92	79.43
TraesCS1B01G068900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	57.5	78.86
OQU86913	Sorghum	extracellular	30.0	78.26
HORVU5Hr1G079270.1	Barley	extracellular	29.58	77.17
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	56.25	77.14
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	56.25	74.59
CDY45493	Canola	extracellular	19.58	73.44
HORVU5Hr1G079280.1	Barley	extracellular	19.58	65.28
Solyc10g045750.1.1	Tomato	extracellular	21.25	52.58
KRG62078	Soybean	endoplasmic reticulum, extracellular, plasma membrane	37.92	37.14
GRMZM5G804358_P02	Maize	plasma membrane	59.17	28.69
BAC19875	Rice	plasma membrane	58.75	28.48
VIT_00s0629g00020.t01	Wine grape	mitochondrion	7.5	9.09

Protein Annotations

MapMan:35.1	UniProt:A0A0R0HRE0	EMBL:ACUP02006315	EnsemblPlantsGene:GLYMA_10G098500	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0055114	EnsemblPlants:KRH33086	ProteinID:KRH33086
ProteinID:KRH33086.1	InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix	UniParc:UPI0006ED7EE5

Description

hypothetical protein

Coordinates

chr10:-:17196625..17197535

Molecular Weight (calculated)

27144.0 Da

IEP (calculated)

7.530

GRAVY (calculated)

0.534

Length

240 amino acids

Sequence
(BLAST)

001: MLEHFCECYS DLSGLILCPV QGSIIPLFIP NSRIRPIRLI GLCASLITFL YSPTPRIQFD PSTVKSQFVE CLRWLPYENI NLNLGIDDLS FFFVILTTFL
101: IPICILMGWS GMRSYGKEYI TTSLIHEFLM IVVLRMLDPL LFYVLPESVL IPMLCGAEHL LFIGIKLFLC RVTSTRLLGS CMDMQEGVLL GVCRGCVYSR
201: EWIPRQVSLG GVDTLARIRV KATWEKSKGN CTQPGMDVNS

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.