Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g061990.1.1 | Tomato | plasma membrane | 37.55 | 48.17 |
| KRH33086 | Soybean | plasma membrane | 37.14 | 37.92 |
| VIT_00s0629g00020.t01 | Wine grape | mitochondrion | 29.39 | 36.36 |
| ATMG00580.1 | Thale cress | plasma membrane | 68.98 | 34.14 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0C7N6 | EnsemblPlantsGene:GLYMA_U008600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006091 | GO:GO:0006139 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042773 | GO:GO:0055114 | EnsemblPlants:KRG62078 | ProteinID:KRG62078 |
| ProteinID:KRG62078.1 | InterPro:NADH_UbQ_OxRdtase | InterPro:ND/Mrp_mem | PFAM:PF00361 | PRINTS:PR01437 | PANTHER:PTHR43507 |
| PANTHER:PTHR43507:SF6 | TMHMM:TMhelix | UniParc:UPI0006EDC326 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_1990:-:33..1626
Molecular Weight (calculated)
27628.7 Da
IEP (calculated)
9.149
GRAVY (calculated)
0.785
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQFLAPFSS NLSGLILCPL LGSIILFVIP DPRIRLIRSI GLCTSLITFL YSLLPRIQFE NSTAKFQFVE TIRWLPYSNI NFYIGWSSIK GYKKEYMIAF
101: LICESFMIAV FRMPDLLSSY VFSESVLIPM LCGVEHLIFA ARSAASAGAL CRVWGSRQRK IQAAYQFFLY TLLGSVFMLL AILFIFFQTG TTYLQILLTT
201: ELMPMVPVHI WLPEAHVEAP TAGSVILAGI LSKLGTYGFL RFSIP
101: LICESFMIAV FRMPDLLSSY VFSESVLIPM LCGVEHLIFA ARSAASAGAL CRVWGSRQRK IQAAYQFFLY TLLGSVFMLL AILFIFFQTG TTYLQILLTT
201: ELMPMVPVHI WLPEAHVEAP TAGSVILAGI LSKLGTYGFL RFSIP
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
Arabidopsis Description
NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.