Factsheet for HORVU5Hr1G079270.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86913	Sorghum	extracellular	97.83	97.83
CDY45493	Canola	extracellular	57.61	82.81
HORVU5Hr1G079280.1	Barley	extracellular	63.04	80.56
Solyc10g045750.1.1	Tomato	extracellular	54.35	51.55
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	97.83	51.43
HORVU0Hr1G033670.1	Barley	vacuole	93.48	50.29
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	93.48	47.51
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	88.04	46.29
KRH33086	Soybean	plasma membrane	77.17	29.58
HORVU7Hr1G058380.2	Barley	endoplasmic reticulum	75.0	28.16
BAV58151	Barley	plasma membrane	80.43	14.95
ATMG00580.1	Thale cress	plasma membrane	70.65	13.13
HORVU2Hr1G061070.1	Barley	extracellular, vacuole	3.26	5.88
VIT_00s0629g00020.t01	Wine grape	mitochondrion	7.61	3.54
HORVU6Hr1G044660.2	Barley	endoplasmic reticulum	4.35	2.23
HORVU5Hr1G079410.1	Barley	endoplasmic reticulum	4.35	2.23
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	1.09	1.33

Protein Annotations

EnsemblPlants:HORVU5Hr1G079270.1	EnsemblPlantsGene:HORVU5Hr1G079270	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0042773	GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6
TMHMM:TMhelix	UniParc:UPI000B487046	UniProt:A0A287RY10	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:556640163..556640690

Molecular Weight (calculated)

10242.2 Da

IEP (calculated)

5.688

GRAVY (calculated)

1.232

Length

92 amino acids

Sequence
(BLAST)

1: MGIDGLSLFF VILTTFLIPI CISVGWSSMR SFGKEYITAF LIREFLMIAV SCMLDPLLFY VLSESVPIPM LCGAEHLLFA GIKLFLCKGL VQ

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.