Factsheet for VIT_01s0127g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99341	Soybean	nucleus	73.44	78.01
KRH45667	Soybean	nucleus	78.91	77.99
PGSC0003DMT400079571	Potato	cytosol	75.0	75.0
GSMUA_Achr3P31010_001	Banana	cytosol	58.59	74.63
KRH69565	Soybean	nucleus	80.47	74.1
KRH74596	Soybean	nucleus	80.08	73.74
GSMUA_Achr7P26920_001	Banana	cytosol	56.64	72.14
Solyc05g005490.2.1	Tomato	plastid	75.0	71.64
GSMUA_Achr1P13950_001	Banana	cytosol	55.08	70.15
Bra007912.1-P	Field mustard	cytosol	67.58	67.05
Bra016223.1-P	Field mustard	cytosol	66.41	65.89
CDY69444	Canola	cytosol	66.02	65.5
AT1G23730.2	Thale cress	cytosol	65.62	65.12
CDY28477	Canola	cytosol	65.62	64.86
Bra012384.1-P	Field mustard	cytosol	65.23	64.73
CDY25799	Canola	cytosol	65.23	64.48
KXG32976	Sorghum	cytosol	50.0	63.37
CDY64836	Canola	plastid	49.61	63.18
CDX93638	Canola	cytosol	55.47	62.83
Bra018699.1-P	Field mustard	cytosol	55.08	62.39
Bra018698.1-P	Field mustard	cytosol	62.89	62.16
Zm00001d044095_P001	Maize	extracellular	48.44	62.0
CDY57304	Canola	cytosol	67.58	61.79
CDY03752	Canola	cytosol	67.58	61.79
CDY61543	Canola	cytosol	62.11	61.39
CDX93637	Canola	cytosol	53.52	61.16
Bra024615.1-P	Field mustard	cytosol	61.72	61.0
AT1G70410.2	Thale cress	cytosol	66.41	60.71
CDY57847	Canola	plastid	66.41	60.71
TraesCS7D01G443400.1	Wheat	cytosol	47.66	60.4
KXG32973	Sorghum	cytosol	48.05	60.29
CDY64834	Canola	cytosol	60.94	60.23
TraesCS7B01G354800.1	Wheat	cytosol	47.27	59.9
CDY47630	Canola	cytosol	54.3	59.15
VIT_17s0000g08450.t01	Wine grape	cytosol	59.38	58.69
GSMUA_Achr9P07050_001	Banana	plastid	59.38	58.24
VIT_17s0000g08460.t01	Wine grape	cytosol	58.59	57.47
TraesCS7D01G443500.1	Wheat	cytosol	44.14	57.07
GSMUA_Achr4P14900_001	Banana	plastid	58.98	56.77
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	59.38	56.09
VIT_14s0066g01210.t01	Wine grape	plastid	70.7	54.03
VIT_11s0065g00100.t01	Wine grape	cytosol	40.23	53.37
Zm00001d011454_P001	Maize	plastid	50.78	53.06
TraesCS3A01G230100.1	Wheat	cytosol, plastid	49.22	50.4
Zm00001d044096_P001	Maize	cytosol	46.88	50.21
TraesCS3B01G259400.1	Wheat	cytosol, plastid	48.83	50.0
TraesCS3D01G223300.1	Wheat	plastid	50.39	50.0
TraesCS3A01G230000.2	Wheat	plastid	50.39	49.81
TraesCS3B01G259300.1	Wheat	golgi, plastid	50.0	49.61
TraesCS3D01G223200.1	Wheat	cytosol, plastid	48.44	49.6
HORVU3Hr1G056990.2	Barley	cytosol, plastid	48.44	49.6
TraesCS7A01G454300.1	Wheat	extracellular, plastid	47.27	49.19
HORVU3Hr1G057090.2	Barley	plastid	50.0	48.85
TraesCS7A01G454500.1	Wheat	cytosol	40.62	48.83
TraesCS7B01G354900.1	Wheat	plastid	46.09	48.36
TraesCS7A01G454400.1	Wheat	plastid	44.53	47.7
KXG32978	Sorghum	cytosol, extracellular, plastid	47.27	47.27
Os01t0639900-01	Rice	extracellular, nucleus	48.05	45.22
Os01t0640000-00	Rice	plastid	37.89	40.93
VIT_03s0017g00270.t01	Wine grape	plastid	42.97	36.54
VIT_18s0001g07400.t01	Wine grape	plastid	42.19	34.5
VIT_17s0000g08470.t01	Wine grape	plastid	22.66	34.32
HORVU7Hr1G103870.12	Barley	cytosol, plastid	48.44	33.79
Zm00001d044099_P002	Maize	plastid	50.0	28.32
KXG32970	Sorghum	cytosol	48.83	27.9

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:100852632	wikigene:100852632	Gene3D:3.40.1050.10	MapMan:35.1	ProteinID:CBI28524
ProteinID:CBI28524.3	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	UniProt:D7TDF1	EMBL:FN595761
GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	EntrezGene:LOC100852632	wikigene:LOC100852632	PFAM:PF00484
ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF38	SMART:SM00947	SUPFAM:SSF53056
TIGR:TC59338	TIGR:TC63628	UniParc:UPI0001BE30FD	ArrayExpress:VIT_01s0127g00720	EnsemblPlantsGene:VIT_01s0127g00720	EnsemblPlants:VIT_01s0127g00720.t01
RefSeq:XP_003631257	RefSeq:XP_003631257.1	RefSeq:XP_003631258	RefSeq:XP_003631258.1	RefSeq:XP_010651261.1	:

Description

Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:D7TDF1]

Coordinates

chr1:+:8064491..8071298

Molecular Weight (calculated)

28140.7 Da

IEP (calculated)

4.906

GRAVY (calculated)

-0.105

Length

256 amino acids

Sequence
(BLAST)

001: MATDSCEDAI AELQKLLSEK CGLETVAAAK IKQITAELEK TGSEPFDAVE RIKTGFGRFK TEKYEKNPTL YDELAKGQSP KFMVFACSDS RVCPSHILDF
101: QPGEAFMVRN IANMVPPYDQ TKYSGVGAAI EYAVLHLKVE NIVVIGHSCC GGIKGLMSIP DDGTTASDFI EQWVQICLPA KSKVKTEYTD LTFAEQCTNC
201: EKEAVNVSLG NLLTYPFVRE AVVKKTLALK GAHYDFVNGS FELWSFEVNL SPPLPA

Best Arabidopsis Sequence Match ( AT5G14740.6 )
(BLAST)

001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI

Arabidopsis Description

BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.