Factsheet for VIT_03s0017g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P05560_001	Banana	plastid	39.87	63.49
VIT_18s0001g07400.t01	Wine grape	plastid	59.8	57.51
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	51.83	55.52
PGSC0003DMT400022752	Potato	plastid	52.49	53.74
Zm00001d020764_P004	Maize	plastid	50.83	50.33
Os09t0464000-01	Rice	plastid	49.5	48.69
GSMUA_Achr9P15130_001	Banana	plastid	49.5	48.22
Zm00001d005920_P004	Maize	mitochondrion	49.17	45.82
TraesCS5A01G245700.2	Wheat	mitochondrion	47.51	45.11
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	48.17	44.75
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	47.84	44.58
TraesCS5D01G252400.3	Wheat	mitochondrion	47.51	44.55
VIT_01s0127g00720.t01	Wine grape	cytosol	36.54	42.97
VIT_17s0000g08450.t01	Wine grape	cytosol	34.55	40.15
VIT_17s0000g08460.t01	Wine grape	cytosol	34.55	39.85
VIT_11s0065g00100.t01	Wine grape	cytosol	23.26	36.27
VIT_14s0066g01210.t01	Wine grape	plastid	36.88	33.13
VIT_17s0000g08470.t01	Wine grape	plastid	17.28	30.77
OQU89631	Sorghum	plastid	49.17	30.2

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:100263997	wikigene:100263997	Gene3D:3.40.1050.10	MapMan:35.1	ProteinID:CBI34003
ProteinID:CBI34003.3	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	UniProt:D7TU30	EMBL:FN596248
GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	EntrezGene:LOC100263997	wikigene:LOC100263997	PFAM:PF00484
ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF12	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI0001BE45E9	ArrayExpress:VIT_03s0017g00270	EnsemblPlantsGene:VIT_03s0017g00270	EnsemblPlants:VIT_03s0017g00270.t01	unigene:Vvi.19891	RefSeq:XP_002263870
RefSeq:XP_002263870.2	RefSeq:XP_010648127.1	SEG:seg	:	:	:

Description

Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:D7TU30]

Coordinates

chr3:+:14489675..14494899

Molecular Weight (calculated)

33828.4 Da

IEP (calculated)

6.976

GRAVY (calculated)

-0.227

Length

301 amino acids

Sequence
(BLAST)

001: MAFSSSSLSP FPSISSIDQP TRPSTTRSTI FGSKPKLSVI EQTHVTNLAS LNSQSLRLKA SRESPGLTQE LTSDRLESIA EIENRYDVFD EVKHRFLSFK
101: KHKYLENLEC FQNLATAQAP KFMVIACADS RVCPSKILGF EPGEAFMVRN VANLVPLYEN GPTETNAALE FAVNTLEVEN ILVIGHSCCG GIRALMGMEE
201: EVDSSSFIQS WVVVGKNAKL RAKATASKLS FDQQCRNCEK ESINCSLLNL LTYPWIKERV ERGMLSIHGG YYDFVNCTFE KWTLDYKESG RYLVKDRVFW
301: A

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.