Factsheet for TraesCS5D01G252400.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G245700.2	Wheat	mitochondrion	96.26	97.48
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	95.64	94.75
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	95.02	94.43
GSMUA_Achr5P05560_001	Banana	plastid	47.04	79.89
Os09t0464000-01	Rice	plastid	66.67	69.93
Zm00001d020764_P004	Maize	plastid	65.11	68.75
Zm00001d005920_P004	Maize	mitochondrion	68.54	68.11
GSMUA_Achr9P15130_001	Banana	plastid	58.57	60.84
KRH21767	Soybean	plastid	46.11	49.17
KRH10599	Soybean	plastid	45.79	48.68
AT4G33580.2	Thale cress	plastid	45.79	48.68
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	42.37	48.4
PGSC0003DMT400022752	Potato	plastid	43.93	47.96
VIT_03s0017g00270.t01	Wine grape	plastid	44.55	47.51
CDX68989	Canola	plastid	43.93	46.38
VIT_18s0001g07400.t01	Wine grape	plastid	44.86	46.01
OQU89631	Sorghum	plastid	69.78	45.71
CDY28307	Canola	plastid	44.86	45.43
CDX72409	Canola	plastid	44.55	44.55
Bra037001.1-P	Field mustard	plastid	44.24	44.24
TraesCS7D01G443400.1	Wheat	cytosol	27.73	44.06
CDY46111	Canola	plastid	43.93	43.93
TraesCS7D01G443500.1	Wheat	cytosol	26.48	42.93
AT1G58180.2	Thale cress	mitochondrion	36.45	40.34
KRH72455	Soybean	mitochondrion	38.94	39.19
CDY23811	Canola	mitochondrion, plastid	34.89	38.62
Bra035461.1-P	Field mustard	mitochondrion, plastid	34.89	38.62
CDY46871	Canola	mitochondrion, plastid	34.58	38.01
KRH16842	Soybean	mitochondrion, plastid	25.86	37.9
TraesCS3D01G223300.1	Wheat	plastid	28.66	35.66
TraesCS3D01G223200.1	Wheat	cytosol, plastid	27.73	35.6
CDX75366	Canola	plastid	44.24	35.15
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	43.93	22.56
Bra011454.1-P	Field mustard	cytosol	44.55	22.56
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	44.24	22.36

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270
GO:GO:0015976	InterPro:IPR036874	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002
PANTHER:PTHR11002:SF12	SMART:SM00947	SUPFAM:SSF53056	EnsemblPlantsGene:TraesCS5D01G252400	EnsemblPlants:TraesCS5D01G252400.3	TIGR:cd00884
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:358011940..358015909

Molecular Weight (calculated)

36033.0 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.587

Length

321 amino acids

Sequence
(BLAST)

001: MFPWSLRSAA RRLAAATRAA ASAAVAARSP SPAPWQERPP AVEDREEHQQ RAAVWDDDHR RPRRSDFSCA TKASEDHSGL TRQLLDFQHD TVDETDGGYD
101: PFSQLKERFT DFKQRNYVEN FTNYQKLAEQ QTPEFMVVAC ADSRVCPTSI LGLQPGDAFT VRNVANLVPP YEHGASETTA ALEFAVNSLQ VPNVLVVGHS
201: RCGGIQALMS MKSKKDDRSS RTFIRDWVSL GKSARLSTEA AAGNLSFESQ CRHCEKESIN SSLLNLLTYP WIEERVKEGN LNLHGGYYNF IDCTFEKWTL
301: VYRPGLEGGS KYAIKNRSTW S

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.