CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23811	Canola	mitochondrion, plastid	97.6	98.28
Bra035461.1-P	Field mustard	mitochondrion, plastid	97.26	97.93
AT1G58180.2	Thale cress	mitochondrion	86.99	87.59
GSMUA_Achr5P05560_001	Banana	plastid	32.19	49.74
VIT_18s0001g07400.t01	Wine grape	plastid	46.58	43.45
Solyc09g010970.2.1	Tomato	mitochondrion, plastid	41.44	43.06
KRH72455	Soybean	mitochondrion	44.86	41.07
PGSC0003DMT400022752	Potato	plastid	41.1	40.82
CDY64836	Canola	plastid	27.05	39.3
KRH16842	Soybean	mitochondrion, plastid	29.45	39.27
Zm00001d020764_P004	Maize	plastid	39.73	38.16
Os09t0464000-01	Rice	plastid	39.38	37.58
GSMUA_Achr9P15130_001	Banana	plastid	39.73	37.54
CDX68989	Canola	plastid	39.04	37.5
CDY46111	Canola	plastid	40.41	36.76
CDX72409	Canola	plastid	39.73	36.14
CDY28307	Canola	plastid	38.7	35.65
CDY69444	Canola	cytosol	31.16	35.27
TraesCS5A01G245700.2	Wheat	mitochondrion	37.67	34.7
Zm00001d005920_P004	Maize	mitochondrion	38.36	34.67
TraesCS5D01G252400.3	Wheat	mitochondrion	38.01	34.58
CDY58271	Canola	cytosol	41.1	34.38
CDX93637	Canola	cytosol	26.37	34.38
CDY28477	Canola	cytosol	30.48	34.36
CDY61543	Canola	cytosol	30.48	34.36
CDY64834	Canola	cytosol	30.48	34.36
HORVU5Hr1G069600.9	Barley	mitochondrion, plastid	38.01	34.26
TraesCS5B01G243100.2	Wheat	mitochondrion, plastid	37.67	34.06
CDY25799	Canola	cytosol	29.79	33.59
CDX93638	Canola	cytosol	25.68	33.19
CDY57847	Canola	plastid	31.16	32.5
CDY03752	Canola	cytosol	30.82	32.14
CDY57304	Canola	cytosol	30.82	32.14
CDX91024	Canola	cytosol	28.42	32.05
CDX85584	Canola	cytosol	28.08	31.66
CDY47630	Canola	cytosol	25.0	31.06
CDX75366	Canola	plastid	40.07	28.96
CDX84518	Canola	plastid	42.12	27.39
CDY28672	Canola	plastid	29.45	25.0
OQU89631	Sorghum	plastid	40.41	24.08
CDY37516	Canola	plastid	27.74	23.48
CDY49059	Canola	plastid	26.37	20.21
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	38.36	17.64

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	GO:A0A078IAI0	UniProt:A0A078IAI0	EnsemblPlants:CDY46871
ProteinID:CDY46871	ProteinID:CDY46871.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976
GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00086326001	InterPro:IPR036874	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705
PANTHER:PTHR11002	PANTHER:PTHR11002:SF19	MetaCyc:PWY-241	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117
SMART:SM00947	SUPFAM:SSF53056	UniParc:UPI0004EE67CE	:	:	:

Description

BnaC01g27750DCarbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:A0A078IAI0]

Coordinates

chrLK032688:-:92683..94538

Molecular Weight (calculated)

33342.9 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.477

Length

292 amino acids

Sequence
(BLAST)

001: MALTLCGRAR RLVSVSATSV YSNGRLQRLQ QTGSNRFQLG EAKAIRLLPR RTNMVQELGS REEFMQENRD TETSYDFLGE MRQRFLRFKR QKYLPQIEKF
101: QALAVAQSPK VMVIGCADSR VCPSYVLGFQ PGEAFTIRNV ANLITPIQNG PTETNSALEF AVTTLQVENI IVMGHRNCGG IAALMNHQNH LEQPSSLVER
201: WVMNGKAAKL RTQEASSHLS FDEQCRNCEK ESIKDSVMNL ITYPWIRDRV KSGEVKIHGC YYNLSDCSLE KWRLSSDKNS NEFYVSDKEI WN

Best Arabidopsis Sequence Match ( AT1G58180.2 )
(BLAST)

001: MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA
101: LAIAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMSHQNHQG QHSSLVERWV
201: MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT YSWIRDRVKR GEVKIHGCYY NLSDCSLEKW RLSSDKTNYG FYISDREIWS

Arabidopsis Description

BCA6Beta carbonic anhydrase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C6F5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.