CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024288.1-P	Field mustard	plastid	65.03	95.42
CDY58271	Canola	cytosol	73.72	94.84
CDX68989	Canola	plastid	38.08	56.25
CDY28307	Canola	plastid	39.42	55.84
CDY46111	Canola	plastid	39.42	55.14
CDX72409	Canola	plastid	38.98	54.52
CDY64836	Canola	plastid	22.94	51.24
CDY28477	Canola	cytosol	26.95	46.72
CDY25799	Canola	cytosol	26.95	46.72
CDY61543	Canola	cytosol	26.73	46.33
CDX93638	Canola	cytosol	23.16	46.02
CDY69444	Canola	cytosol	26.28	45.74
CDY03752	Canola	cytosol	28.06	45.0
CDY57304	Canola	cytosol	28.06	45.0
CDY64834	Canola	cytosol	25.84	44.79
CDX93637	Canola	cytosol	22.27	44.64
CDY47630	Canola	cytosol	23.16	44.26
CDX91024	Canola	cytosol	25.39	44.02
CDX85584	Canola	cytosol	25.39	44.02
CDY57847	Canola	plastid	27.17	43.57
CDY23811	Canola	mitochondrion, plastid	27.62	42.76
CDY46871	Canola	mitochondrion, plastid	27.39	42.12
CDX75366	Canola	plastid	37.42	41.58
CDY28672	Canola	plastid	27.62	36.05
CDY37516	Canola	plastid	25.39	33.04
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	45.88	32.44
CDY49059	Canola	plastid	24.28	28.61

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	GO:A0A078DB41	EnsemblPlants:CDX84518	ProteinID:CDX84518
ProteinID:CDX84518.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	EnsemblPlantsGene:GSBRNA2T00141751001
InterPro:IPR036874	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF12
MetaCyc:PWY-241	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI0004EF4CCF	SEG:seg	:	:	:	:

Description

BnaC03g49820D

Coordinates

chrLK031837:-:1580952..1584246

Molecular Weight (calculated)

50878.7 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.241

Length

449 amino acids

Sequence
(BLAST)

001: MFNCSGDSSP LIPWNPCSWN LLLYMAQNSD FFLPSWYTIF CIVTRKMFYL ISFHLPVSCN ESLQEDAITN AQVDSRRKIK AMPTIPECWS TVKYMEISVF
101: VGEDEIYMLL DPTDELPDSS KVHLFSISTL YTSTGFTQLH FSTMAIVSSI MSTSVDLSSS GVCVFPNTSK IFGNNANQLP TYLRLSTSSR RHAKLRLAAS
201: ISKVPLKLTR EEKHQDHVAS PEKGHDVFEE IKHRFLTFKK DKYMDNLERF QSLAKSQSPK FMVIACADSR VCPSEILGFQ PGEAFTVRNI ANIVPTYESG
301: PSETKAALEF AVNSLQVENI LVVGHSRCGG IRALMTMDDD ETEEGIDSRS FIKNWVVIGK PAKSISKSAA SELSFDQQCQ HCEKESVNCS LRNLLSYPWI
401: EERVKKGILT IHGGYYDFTE CTFEKWTVDY KERSCGERKL AVKDRSIWN

Best Arabidopsis Sequence Match ( AT1G58180.2 )
(BLAST)

001: MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA
101: LAIAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMSHQNHQG QHSSLVERWV
201: MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT YSWIRDRVKR GEVKIHGCYY NLSDCSLEKW RLSSDKTNYG FYISDREIWS

Arabidopsis Description

BCA6Beta carbonic anhydrase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C6F5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.