Factsheet for Bra024288.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58271	Canola	cytosol	97.71	85.67
CDX84518	Canola	plastid	95.42	65.03
Bra037001.1-P	Field mustard	plastid	55.56	52.96
Bra007912.1-P	Field mustard	cytosol	40.2	47.67
Bra016223.1-P	Field mustard	cytosol	39.22	46.51
Bra012384.1-P	Field mustard	cytosol	38.56	45.74
Bra018699.1-P	Field mustard	cytosol	33.66	45.58
Bra018698.1-P	Field mustard	cytosol	38.24	45.17
Bra024615.1-P	Field mustard	cytosol	38.24	45.17
Bra023485.1-P	Field mustard	cytosol	36.93	43.63
Bra035461.1-P	Field mustard	mitochondrion, plastid	39.54	41.72
Bra040520.1-P	Field mustard	plastid	37.58	34.53
Bra039113.1-P	Field mustard	plastid	35.95	32.93
Bra034573.1-P	Field mustard	endoplasmic reticulum, nucleus, plastid	55.88	27.36
Bra011454.1-P	Field mustard	cytosol	54.25	26.18

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	EnsemblPlantsGene:Bra024288	EnsemblPlants:Bra024288.1	EnsemblPlants:Bra024288.1-P
InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089
GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874
UniProt:M4E684	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF12
SMART:SM00947	SUPFAM:SSF53056	UniParc:UPI000253F3AB	SEG:seg	:	:

Description

AT4G33580 (E=1e-087) ATBCA5, BCA5 | carbonic anhydrase family protein / carbonate dehydratase family protein

Coordinates

chrA06:-:14751562..14753258

Molecular Weight (calculated)

34344.7 Da

IEP (calculated)

7.476

GRAVY (calculated)

-0.391

Length

306 amino acids

Sequence
(BLAST)

001: MAIVSSIMPT SVDPSSSGVC VFHNTSKIFG NNANQLPTYL RLSTSSRRHA KLRLAASISK GPLKLTREEK HQDHVASPEK GHDVFEEIKH RFLTFKKDKY
101: MGNLERFQSL AKSQSPKFMV IACADSRVCP SEILGFQPGE AFTVRNIANI VPTYESGPSE TKAALEFAVN SLQVENILVV GHSRCGGIRA LMTMDDDETE
201: EDIDSRSFIK NWVVIGKPAR SISKSAASEL SFDQQCQHCE KESVSCSLQN LLSYPWIEER VNKGTLTIHG GYYDFTECTF EKWTVDYKER SCVERTLAVK
301: DRSIWS

Best Arabidopsis Sequence Match ( AT4G33580.1 )
(BLAST)

001: MAATPTHFSV SHDPFSSTSL LNLQTQAIFG PNHSLKTTQL RIPASFRRKA TNLQVMASGK TPGLTQEANG VAIDRQNNTD VFDDMKQRFL AFKKLKYMDD
101: FEHYKNLADA QAPKFLVIAC ADSRVCPSAV LGFQPGDAFT VRNIANLVPP YESGPTETKA ALEFSVNTLN VENILVIGHS RCGGIQALMK MEDEGDSRSF
201: IHNWVVVGKK AKESTKAVAS NLHFDHQCQH CEKASINHSL ERLLGYPWIE EKVRQGSLSL HGGYYNFVDC TFEKWTVDYA ASRGKKKEGS GIAVKDRSVW
301: S

Arabidopsis Description

ATBCA5beta carbonic anhydrase 5 [Source:TAIR;Acc:AT4G33580]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.