CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024288.1-P	Field mustard	plastid	85.67	97.71
CDX84518	Canola	plastid	94.84	73.72
CDX68989	Canola	plastid	47.85	54.93
CDY28307	Canola	plastid	49.86	54.89
CDY46111	Canola	plastid	49.28	53.58
CDX72409	Canola	plastid	48.71	52.96
CDY64836	Canola	plastid	28.94	50.25
CDY69444	Canola	cytosol	34.1	46.12
CDY25799	Canola	cytosol	34.1	45.95
CDY28477	Canola	cytosol	34.1	45.95
CDY61543	Canola	cytosol	33.81	45.56
CDX93638	Canola	cytosol	29.23	45.13
CDY03752	Canola	cytosol	35.82	44.64
CDY57304	Canola	cytosol	35.82	44.64
CDX93637	Canola	cytosol	28.37	44.2
CDX85584	Canola	cytosol	32.66	44.02
CDY64834	Canola	cytosol	32.66	44.02
CDX91024	Canola	cytosol	32.66	44.02
CDY47630	Canola	cytosol	29.23	43.4
CDY57847	Canola	plastid	34.67	43.21
CDY23811	Canola	mitochondrion, plastid	34.67	41.72
CDY46871	Canola	mitochondrion, plastid	34.38	41.1
CDX75366	Canola	plastid	47.56	41.09
CDY28672	Canola	plastid	34.96	35.47
CDY37516	Canola	plastid	32.09	32.46
CDY48445	Canola	cytosol, endoplasmic reticulum, plastid	51.58	28.35
CDY49059	Canola	plastid	30.37	27.82

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	GO:A0A078J3I4	UniProt:A0A078J3I4	EnsemblPlants:CDY58271
ProteinID:CDY58271	ProteinID:CDY58271.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150	GO:GO:0008270	GO:GO:0015976
GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00023337001	InterPro:IPR036874	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705
PANTHER:PTHR11002	PANTHER:PTHR11002:SF12	MetaCyc:PWY-241	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117
SMART:SM00947	SUPFAM:SSF53056	UniParc:UPI0004EE7FEB	SEG:seg	:	:

Description

BnaAnng15140DCarbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:A0A078J3I4]

Coordinates

chrLK033651:+:42297..44424

Molecular Weight (calculated)

39453.8 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.352

Length

349 amino acids

Sequence
(BLAST)

001: MTECWSTVNA YMEISVFVGE DEIYMLLDPT GELPDNSKLH FSTMAIVSSI MPTSVDPSSS GVYVFHNTSK IFGNNANQLP TYLRLSTSSR RHAKLRLAAS
101: ISKVPLKLTR EEKHQDHVAS PEKGHDVFEE IKHRFLTFKK DKYMDNLERF QSLAKSQSPK FMVIACADSR VCPSEILGFQ PGEAFTVRNI ANIVPTYESG
201: PSETKAALEF AVNSLQVENI LVVGHSRCGG IRALMTMDDD ETEEDIDSRS FIKNWVVIGK PARSISKSAA SELSFDQQCQ HCEKESVNCS LQNLLSYPWI
301: EERVNKGTLT IHGGYYDFTE CTFEKWTVVY KERSCIERKL AVKDRSIWS

Best Arabidopsis Sequence Match ( AT1G58180.2 )
(BLAST)

001: MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA
101: LAIAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMSHQNHQG QHSSLVERWV
201: MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT YSWIRDRVKR GEVKIHGCYY NLSDCSLEKW RLSSDKTNYG FYISDREIWS

Arabidopsis Description

BCA6Beta carbonic anhydrase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C6F5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.