Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P31010_001 | Banana | cytosol | 84.58 | 84.58 |
| GSMUA_Achr1P13950_001 | Banana | cytosol | 77.61 | 77.61 |
| KXG32976 | Sorghum | cytosol | 64.68 | 64.36 |
| Zm00001d044095_P001 | Maize | extracellular | 63.18 | 63.5 |
| GSMUA_Achr4P14900_001 | Banana | plastid | 82.59 | 62.41 |
| TraesCS7B01G354800.1 | Wheat | cytosol | 61.19 | 60.89 |
| TraesCS7D01G443400.1 | Wheat | cytosol | 61.19 | 60.89 |
| TraesCS7D01G443500.1 | Wheat | cytosol | 58.71 | 59.6 |
| KXG32973 | Sorghum | cytosol | 59.7 | 58.82 |
| GSMUA_Achr9P07050_001 | Banana | plastid | 75.62 | 58.24 |
| GSMUA_Achr6P27350_001 | Banana | plasma membrane, plastid | 76.62 | 56.83 |
| VIT_01s0127g00720.t01 | Wine grape | cytosol | 72.14 | 56.64 |
| PGSC0003DMT400079571 | Potato | cytosol | 70.15 | 55.08 |
| CDY64836 | Canola | plastid | 54.23 | 54.23 |
| PGSC0003DMT400017914 | Potato | cytosol | 38.31 | 53.85 |
| Solyc05g005490.2.1 | Tomato | plastid | 70.65 | 52.99 |
| Bra007912.1-P | Field mustard | cytosol | 67.16 | 52.33 |
| Bra023485.1-P | Field mustard | cytosol | 66.67 | 51.74 |
| CDX85584 | Canola | cytosol | 66.67 | 51.74 |
| CDX91024 | Canola | cytosol | 66.67 | 51.74 |
| Zm00001d044096_P001 | Maize | cytosol | 61.19 | 51.46 |
| CDY69444 | Canola | cytosol | 65.67 | 51.16 |
| Bra016223.1-P | Field mustard | cytosol | 65.67 | 51.16 |
| Zm00001d011454_P001 | Maize | plastid | 62.19 | 51.02 |
| KRH45667 | Soybean | nucleus | 65.67 | 50.97 |
| KRG99341 | Soybean | nucleus | 60.7 | 50.62 |
| TraesCS7A01G454500.1 | Wheat | cytosol | 53.23 | 50.23 |
| TraesCS7A01G454400.1 | Wheat | plastid | 59.2 | 49.79 |
| Solyc02g067750.2.1 | Tomato | plastid | 62.69 | 49.41 |
| TraesCS7A01G454300.1 | Wheat | extracellular, plastid | 60.2 | 49.19 |
| TraesCS7B01G354900.1 | Wheat | plastid | 59.7 | 49.18 |
| CDY25799 | Canola | cytosol | 63.18 | 49.03 |
| TraesCS3D01G223300.1 | Wheat | plastid | 62.69 | 48.84 |
| Bra012384.1-P | Field mustard | cytosol | 62.69 | 48.84 |
| CDY28477 | Canola | cytosol | 62.69 | 48.65 |
| TraesCS3A01G230000.2 | Wheat | plastid | 62.69 | 48.65 |
| KRH74596 | Soybean | nucleus | 67.16 | 48.56 |
| KRH69565 | Soybean | nucleus | 67.16 | 48.56 |
| TraesCS3B01G259300.1 | Wheat | golgi, plastid | 62.19 | 48.45 |
| CDY57304 | Canola | cytosol | 67.16 | 48.21 |
| CDY03752 | Canola | cytosol | 67.16 | 48.21 |
| HORVU3Hr1G057090.2 | Barley | plastid | 62.69 | 48.09 |
| TraesCS3D01G223200.1 | Wheat | cytosol, plastid | 59.7 | 48.0 |
| TraesCS3B01G259400.1 | Wheat | cytosol, plastid | 59.7 | 48.0 |
| TraesCS3A01G230100.1 | Wheat | cytosol, plastid | 59.7 | 48.0 |
| AT1G23730.2 | Thale cress | cytosol | 61.19 | 47.67 |
| HORVU3Hr1G056990.2 | Barley | cytosol, plastid | 58.71 | 47.2 |
| CDY57847 | Canola | plastid | 65.67 | 47.14 |
| CDX93638 | Canola | cytosol | 52.74 | 46.9 |
| Bra018699.1-P | Field mustard | cytosol | 52.74 | 46.9 |
| CDY61543 | Canola | cytosol | 60.2 | 46.72 |
| AT1G70410.2 | Thale cress | cytosol | 64.68 | 46.43 |
| VIT_17s0000g08450.t01 | Wine grape | cytosol | 59.7 | 46.33 |
| Bra024615.1-P | Field mustard | cytosol | 59.7 | 46.33 |
| KXG32978 | Sorghum | cytosol, extracellular, plastid | 58.71 | 46.09 |
| Bra018698.1-P | Field mustard | cytosol | 59.2 | 45.95 |
| VIT_17s0000g08460.t01 | Wine grape | cytosol | 58.21 | 44.83 |
| CDY47630 | Canola | cytosol | 52.24 | 44.68 |
| Os01t0639900-01 | Rice | extracellular, nucleus | 60.2 | 44.49 |
| CDY64834 | Canola | cytosol | 57.21 | 44.4 |
| CDX93637 | Canola | cytosol | 49.25 | 44.2 |
| GSMUA_Achr5P05560_001 | Banana | plastid | 41.29 | 43.92 |
| KRH54402 | Soybean | cytosol | 56.72 | 43.68 |
| Solyc02g086820.2.1 | Tomato | plastid | 67.16 | 42.06 |
| PGSC0003DMT400001297 | Potato | cytosol, extracellular, plastid | 67.16 | 42.06 |
| VIT_11s0065g00100.t01 | Wine grape | cytosol | 40.3 | 41.97 |
| AT5G14740.1 | Thale cress | plastid | 67.16 | 40.79 |
| VIT_14s0066g01210.t01 | Wine grape | plastid | 67.16 | 40.3 |
| Bra040520.1-P | Field mustard | plastid | 65.17 | 39.34 |
| Bra039113.1-P | Field mustard | plastid | 65.17 | 39.22 |
| Os01t0640000-00 | Rice | plastid | 45.77 | 38.82 |
| CDY28672 | Canola | plastid | 65.17 | 38.08 |
| AT3G01500.2 | Thale cress | plastid | 65.17 | 37.75 |
| KRG93289 | Soybean | nucleus, plastid | 63.68 | 37.54 |
| KRH56601 | Soybean | plastid | 63.18 | 37.46 |
| CDY37516 | Canola | plastid | 59.2 | 34.49 |
| HORVU7Hr1G103870.12 | Barley | cytosol, plastid | 62.19 | 34.06 |
| VIT_17s0000g08470.t01 | Wine grape | plastid | 27.86 | 33.14 |
| CDY49059 | Canola | plastid | 59.7 | 31.5 |
| GSMUA_Achr9P15130_001 | Banana | plastid | 48.26 | 31.39 |
| Zm00001d044099_P002 | Maize | plastid | 62.69 | 27.88 |
| KXG32970 | Sorghum | cytosol | 60.2 | 27.01 |
Protein Annotations
| KEGG:00910+4.2.1.1 | Gene3D:3.40.1050.10 | MapMan:35.1 | InterPro:Carbonic_anhydrase | InterPro:Carbonic_anhydrase_CS | InterPro:Carbonic_anhydrase_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004089 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008270 |
| GO:GO:0015976 | GO:GO:0016829 | EnsemblPlantsGene:GSMUA_Achr7G26920_001 | EnsemblPlants:GSMUA_Achr7P26920_001 | EnsemblPlants:GSMUA_Achr7T26920_001 | InterPro:IPR036874 |
| UniProt:M0TL28 | PFAM:PF00484 | ScanProsite:PS00704 | ScanProsite:PS00705 | PANTHER:PTHR11002 | PANTHER:PTHR11002:SF27 |
| SMART:SM00947 | SUPFAM:SSF53056 | UniParc:UPI000296E319 | : | : | : |
Description
Carbonic anhydrase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G26920_001]
Coordinates
chr7:+:28059075..28061355
Molecular Weight (calculated)
22437.9 Da
IEP (calculated)
4.804
GRAVY (calculated)
-0.089
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVERLTSG FERFKKEVYE NDPTLFSQLA QGQSPKFLVF ACADSRVCPS VVLSFQPGEA FIVRNIANMV PPYDQTRYSG VGAAVEYAVV HLKVEYIVVI
101: GHSRCGGIKG LMSMKEDGTT SSDFIEEWMK ICLPAMEKVK AEHSALPFTD QCTQCEKEAV NISLENLKTY PFVTEEVEKN TLKLIGAHYD FVAGSFGTWE
201: I
101: GHSRCGGIKG LMSMKEDGTT SSDFIEEWMK ICLPAMEKVK AEHSALPFTD QCTQCEKEAV NISLENLKTY PFVTEEVEKN TLKLIGAHYD FVAGSFGTWE
201: I
001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI
Arabidopsis Description
BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.