Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000255.1-P | Field mustard | cytosol, golgi, plastid | 26.29 | 77.27 |
| CDY35381 | Canola | cytosol, golgi, plastid | 26.29 | 77.27 |
| Zm00001d020930_P001 | Maize | mitochondrion | 44.33 | 74.78 |
| EER99083 | Sorghum | mitochondrion | 43.81 | 73.91 |
| TraesCS5B01G263600.1 | Wheat | mitochondrion | 43.3 | 70.59 |
| HORVU5Hr1G073100.1 | Barley | mitochondrion | 43.3 | 70.59 |
| Os09t0487500-01 | Rice | mitochondrion | 42.27 | 70.09 |
| TraesCS5D01G271800.1 | Wheat | mitochondrion | 42.27 | 68.91 |
| TraesCS5A01G264300.1 | Wheat | mitochondrion | 42.27 | 68.91 |
| EES14275 | Sorghum | mitochondrion | 43.81 | 68.55 |
| Os08t0505001-01 | Rice | mitochondrion | 33.51 | 65.66 |
| Zm00001d031431_P001 | Maize | mitochondrion | 40.21 | 65.0 |
| CDX79882 | Canola | mitochondrion | 36.08 | 62.5 |
| CDY53496 | Canola | plastid | 36.08 | 60.87 |
| VIT_08s0007g07900.t01 | Wine grape | mitochondrion | 35.05 | 60.71 |
| AT3G57785.1 | Thale cress | mitochondrion | 35.57 | 60.53 |
| Bra004680.1-P | Field mustard | mitochondrion | 35.05 | 60.18 |
| CDY14824 | Canola | plastid | 34.54 | 59.82 |
| AT2G42310.1 | Thale cress | plastid | 35.05 | 59.65 |
| PGSC0003DMT400032969 | Potato | mitochondrion | 33.51 | 59.09 |
| Solyc02g085540.1.1 | Tomato | mitochondrion | 33.51 | 59.09 |
| KRH71875 | Soybean | plastid | 37.63 | 57.03 |
| KRH33026 | Soybean | plastid | 37.11 | 55.38 |
| CDY47963 | Canola | cytosol | 38.66 | 37.88 |
| Bra016884.1-P | Field mustard | cytosol | 38.66 | 37.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P02050_001 | EnsemblPlants:GSMUA_Achr7T02050_001 | EnsemblPlantsGene:GSMUA_Achr7G02050_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31339 | PANTHER:PTHR31339:SF38 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00029480FB | UniProt:M0TDZ5 |
| MapMan:2.4.1.4.2.7 | : | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G02050_001]
Coordinates
chr7:+:1576331..1577196
Molecular Weight (calculated)
21784.4 Da
IEP (calculated)
10.226
GRAVY (calculated)
-0.230
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNMNNNIVY FKYVELIIFL FNLNLGKRIF IFLFEMWPRE ALWPGPFLIA LTRAKSRPEQ GVKVSRSSSS ISYSPDTAMA PLPSKAIAAV SGMVRQRLRA
101: AVRTRGGGGE GAGRWTSPGT EERPKGYIFN RLPPPPGKSR EWEDWELPCY ITSFLAIVIL GVGLNAKPDL TLETWAHQKA LERLQKQETA SDSD
101: AVRTRGGGGE GAGRWTSPGT EERPKGYIFN RLPPPPGKSR EWEDWELPCY ITSFLAIVIL GVGLNAKPDL TLETWAHQKA LERLQKQETA SDSD
001: MASTKPLIVA AKTLRNRIHF RSGSTSTGPS RWATPGHEER PKGYFMNRTP PPPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLASAG DSSG
101: LEMEKLASAG DSSG
Arabidopsis Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q8L3S7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.