Factsheet for Zm00001d031431_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020930_P001	Maize	mitochondrion	80.83	84.35
EES14275	Sorghum	mitochondrion	83.33	80.65
Bra000255.1-P	Field mustard	cytosol, golgi, plastid	42.5	77.27
CDY35381	Canola	cytosol, golgi, plastid	42.5	77.27
Os08t0505001-01	Rice	mitochondrion	63.33	76.77
VIT_08s0007g07900.t01	Wine grape	mitochondrion	62.5	66.96
Solyc02g085540.1.1	Tomato	mitochondrion	60.0	65.45
PGSC0003DMT400032969	Potato	mitochondrion	60.0	65.45
CDX79882	Canola	mitochondrion	60.83	65.18
CDY14824	Canola	plastid	60.0	64.29
AT2G42310.1	Thale cress	plastid	60.83	64.04
Bra004680.1-P	Field mustard	mitochondrion	60.0	63.72
AT3G57785.1	Thale cress	mitochondrion	60.0	63.16
CDY53496	Canola	plastid	60.0	62.61
KRH71875	Soybean	plastid	66.67	62.5
KRH33026	Soybean	plastid	65.83	60.77
GSMUA_Achr7P02050_001	Banana	endoplasmic reticulum, extracellular	65.0	40.21
CDY47963	Canola	cytosol	60.0	36.36
Bra016884.1-P	Field mustard	cytosol	60.0	36.36

Protein Annotations

EMBL:EU957355	EnsemblPlants:Zm00001d031431_P001	EnsemblPlants:Zm00001d031431_T001	EnsemblPlantsGene:Zm00001d031431	EntrezGene:100275660	PANTHER:PTHR31339
PANTHER:PTHR31339:SF38	ProteinID:ONM02860.1	SEG:seg	UniParc:UPI000182C2D7	UniProt:B6SX90	MapMan:2.4.1.4.2.7

Description

complex I subunit

Coordinates

chr1:-:189876139..189876501

Molecular Weight (calculated)

13027.4 Da

IEP (calculated)

7.520

GRAVY (calculated)

-0.552

Length

120 amino acids

Sequence
(BLAST)

001: MRAISTAAGG MLRARLRSSS RVRGGGDGAG RWTTPGHEER PKGYLFNRPP PPPGETRKWE DWELPCYITS FLTVVILGVG LNAKPDLTIE TWAHEKALER
101: LKQQELAAVS GGGDADADAE

Best Arabidopsis Sequence Match ( AT2G42310.1 )
(BLAST)

001: MPSTQSLTVA AKTLRNRIFS RSGSTSAGPS RWATPGHEER PKGYFMNRTP PAPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLATAG DSSD

Arabidopsis Description

ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.