Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14824 | Canola | plastid | 55.56 | 98.21 |
| Bra016884.1-P | Field mustard | cytosol | 97.98 | 97.98 |
| CDY35381 | Canola | cytosol, golgi, plastid | 32.32 | 96.97 |
| CDY53496 | Canola | plastid | 51.52 | 88.7 |
| CDX79882 | Canola | mitochondrion | 50.0 | 88.39 |
| Os08t0505001-01 | Rice | mitochondrion | 31.82 | 63.64 |
| Zm00001d020930_P001 | Maize | mitochondrion | 36.87 | 63.48 |
| HORVU5Hr1G073100.1 | Barley | mitochondrion | 37.88 | 63.03 |
| EER99083 | Sorghum | mitochondrion | 36.36 | 62.61 |
| VIT_08s0007g07900.t01 | Wine grape | mitochondrion | 35.35 | 62.5 |
| TraesCS5B01G263600.1 | Wheat | mitochondrion | 37.37 | 62.18 |
| TraesCS5A01G264300.1 | Wheat | mitochondrion | 37.37 | 62.18 |
| PGSC0003DMT400032969 | Potato | mitochondrion | 34.34 | 61.82 |
| Solyc02g085540.1.1 | Tomato | mitochondrion | 34.34 | 61.82 |
| TraesCS5D01G271800.1 | Wheat | mitochondrion | 36.87 | 61.34 |
| Zm00001d031431_P001 | Maize | mitochondrion | 36.36 | 60.0 |
| KRH71875 | Soybean | plastid | 38.38 | 59.38 |
| Os09t0487500-01 | Rice | mitochondrion | 34.85 | 58.97 |
| EES14275 | Sorghum | mitochondrion | 36.87 | 58.87 |
| KRH33026 | Soybean | plastid | 37.88 | 57.69 |
| GSMUA_Achr7P02050_001 | Banana | endoplasmic reticulum, extracellular | 37.88 | 38.66 |
Protein Annotations
| EnsemblPlants:CDY47963 | EnsemblPlantsGene:GSBRNA2T00088587001 | PANTHER:PTHR31339 | PANTHER:PTHR31339:SF38 | ProteinID:CDY47963 | ProteinID:CDY47963.1 |
| SEG:seg | UniParc:UPI0004EDAD99 | UniProt:A0A078IFL6 | MapMan:2.4.1.4.2.7 | : | : |
Description
BnaA04g24410DBnaA04g24410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFL6]
Coordinates
chrLK032747:+:15344..16956
Molecular Weight (calculated)
21702.7 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.548
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKTASVAMD KEVVPLPVVN KDEKSRLDPT AVREAIAVIL AQSKLRSKDK ATKVLVEHDS PAGDGSKPNS HFVTFTSDRS HTPQRSMPST QSLTVAARSL
101: RSRILSRSGS TSAGASRWAT PGHEERPKGF FMNRTPPPPG QSRKWEDWEL PCYVTSFLTI VILGVGLNAK PDLSIETWAH QKALERLEAE RLAGDSSD
101: RSRILSRSGS TSAGASRWAT PGHEERPKGF FMNRTPPPPG QSRKWEDWEL PCYVTSFLTI VILGVGLNAK PDLSIETWAH QKALERLEAE RLAGDSSD
001: MPSTQSLTVA AKTLRNRIFS RSGSTSAGPS RWATPGHEER PKGYFMNRTP PAPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLATAG DSSD
101: LEMEKLATAG DSSD
Arabidopsis Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.