Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000255.1-P | Field mustard | cytosol, golgi, plastid | 100.0 | 100.0 |
| CDX79882 | Canola | mitochondrion | 96.97 | 57.14 |
| CDY14824 | Canola | plastid | 96.97 | 57.14 |
| CDY53496 | Canola | plastid | 98.48 | 56.52 |
| PGSC0003DMT400032969 | Potato | mitochondrion | 78.79 | 47.27 |
| Solyc02g085540.1.1 | Tomato | mitochondrion | 78.79 | 47.27 |
| Os08t0505001-01 | Rice | mitochondrion | 68.18 | 45.45 |
| HORVU5Hr1G073100.1 | Barley | mitochondrion | 81.82 | 45.38 |
| TraesCS5B01G263600.1 | Wheat | mitochondrion | 80.3 | 44.54 |
| TraesCS5A01G264300.1 | Wheat | mitochondrion | 80.3 | 44.54 |
| EER99083 | Sorghum | mitochondrion | 77.27 | 44.35 |
| Zm00001d020930_P001 | Maize | mitochondrion | 77.27 | 44.35 |
| TraesCS5D01G271800.1 | Wheat | mitochondrion | 78.79 | 43.7 |
| VIT_08s0007g07900.t01 | Wine grape | mitochondrion | 72.73 | 42.86 |
| Zm00001d031431_P001 | Maize | mitochondrion | 77.27 | 42.5 |
| Os09t0487500-01 | Rice | mitochondrion | 74.24 | 41.88 |
| KRH71875 | Soybean | plastid | 80.3 | 41.41 |
| EES14275 | Sorghum | mitochondrion | 77.27 | 41.13 |
| KRH33026 | Soybean | plastid | 78.79 | 40.0 |
| CDY47963 | Canola | cytosol | 96.97 | 32.32 |
| GSMUA_Achr7P02050_001 | Banana | endoplasmic reticulum, extracellular | 77.27 | 26.29 |
Protein Annotations
| EnsemblPlants:CDY35381 | EnsemblPlantsGene:GSBRNA2T00058359001 | ProteinID:CDY35381 | ProteinID:CDY35381.1 | UniParc:UPI00025403B7 | UniProt:A0A078HC96 |
| MapMan:2.4.1.4.2.7 | : | : | : | : | : |
Description
BnaA03g19790DBnaA03g19790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC96]
Coordinates
chrLK032351:-:50741..50941
Molecular Weight (calculated)
7521.0 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.465
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MNRTPPPPGQ SRKWEDWELP CYITSFLTIV ILGVGLNAKP DLSIETWAHQ KALERLELER LGDSSD
001: MASTKPLIVA AKTLRNRIHF RSGSTSTGPS RWATPGHEER PKGYFMNRTP PPPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLASAG DSSG
101: LEMEKLASAG DSSG
Arabidopsis Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q8L3S7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.