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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • nucleus 2
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020930_P001 Maize mitochondrion 96.52 96.52
Os09t0487500-01 Rice mitochondrion 90.43 88.89
EES14275 Sorghum mitochondrion 86.96 80.65
Bra000255.1-P Field mustard cytosol, golgi, plastid 44.35 77.27
CDY35381 Canola cytosol, golgi, plastid 44.35 77.27
CDX79882 Canola mitochondrion 63.48 65.18
VIT_08s0007g07900.t01 Wine grape mitochondrion 61.74 63.39
CDY14824 Canola plastid 61.74 63.39
Bra004680.1-P Field mustard mitochondrion 61.74 62.83
Solyc02g085540.1.1 Tomato mitochondrion 60.0 62.73
PGSC0003DMT400032969 Potato mitochondrion 60.0 62.73
AT3G57785.1 Thale cress mitochondrion 61.74 62.28
AT2G42310.1 Thale cress plastid 61.74 62.28
KRH71875 Soybean plastid 67.83 60.94
CDY53496 Canola plastid 60.87 60.87
KRH33026 Soybean plastid 66.96 59.23
GSMUA_Achr7P02050_001 Banana endoplasmic reticulum, extracellular 73.91 43.81
CDY47963 Canola cytosol 62.61 36.36
Bra016884.1-P Field mustard cytosol 62.61 36.36
Protein Annotations
EnsemblPlants:EER99083EnsemblPlantsGene:SORBI_3002G246200EntrezGene:8064843ncoils:CoilPANTHER:PTHR31339PANTHER:PTHR31339:SF16
ProteinID:EER99083ProteinID:EER99083.1RefSeq:XP_002462562.1SEG:segUniParc:UPI0001A84280UniProt:C5X3W1
MapMan:2.4.1.4.2.7:::::
Description
hypothetical protein
Coordinates
chr2:-:63454686..63455263
Molecular Weight (calculated)
12555.0 Da
IEP (calculated)
8.506
GRAVY (calculated)
-0.491
Length
115 amino acids
Sequence
(BLAST)
001: MRAMSSAISG MLRARLRGAA RVRGGGGEGA GRWTTPGHEE SPKGYLFNRP PPPPGESRKW EDWELPCYVT SFLTVVILGV GLNAKPDLTI ETWAHQKALE
101: RLQQQELAAA DAQAE
Best Arabidopsis Sequence Match ( AT3G57785.1 )
(BLAST)
001: MASTKPLIVA AKTLRNRIHF RSGSTSTGPS RWATPGHEER PKGYFMNRTP PPPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLASAG DSSG
Arabidopsis Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q8L3S7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.