Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53496 | Canola | plastid | 94.74 | 93.91 |
| Bra004680.1-P | Field mustard | mitochondrion | 92.98 | 93.81 |
| AT3G57785.1 | Thale cress | mitochondrion | 91.23 | 91.23 |
| Solyc02g085540.1.1 | Tomato | mitochondrion | 61.4 | 63.64 |
| PGSC0003DMT400032969 | Potato | mitochondrion | 61.4 | 63.64 |
| HORVU5Hr1G073100.1 | Barley | mitochondrion | 65.79 | 63.03 |
| Zm00001d020930_P001 | Maize | mitochondrion | 63.16 | 62.61 |
| VIT_08s0007g07900.t01 | Wine grape | mitochondrion | 61.4 | 62.5 |
| TraesCS5B01G263600.1 | Wheat | mitochondrion | 64.91 | 62.18 |
| TraesCS5A01G264300.1 | Wheat | mitochondrion | 64.91 | 62.18 |
| EER99083 | Sorghum | mitochondrion | 62.28 | 61.74 |
| Os08t0505001-01 | Rice | mitochondrion | 53.51 | 61.62 |
| Zm00001d031431_P001 | Maize | mitochondrion | 64.04 | 60.83 |
| TraesCS5D01G271800.1 | Wheat | mitochondrion | 63.16 | 60.5 |
| KRH71875 | Soybean | plastid | 66.67 | 59.38 |
| Os09t0487500-01 | Rice | mitochondrion | 60.53 | 58.97 |
| EES14275 | Sorghum | mitochondrion | 63.16 | 58.06 |
| KRH33026 | Soybean | plastid | 65.79 | 57.69 |
| GSMUA_Achr7P02050_001 | Banana | endoplasmic reticulum, extracellular | 59.65 | 35.05 |
Protein Annotations
| MapMan:2.4.1.4.2.7 | EntrezGene:818832 | UniProt:A0A178VYI3 | ProteinID:AAD23714.1 | ProteinID:AEC10104.1 | ArrayExpress:AT2G42310 |
| EnsemblPlantsGene:AT2G42310 | RefSeq:AT2G42310 | TAIR:AT2G42310 | RefSeq:AT2G42310-TAIR-G | EnsemblPlants:AT2G42310.1 | TAIR:AT2G42310.1 |
| EMBL:AY072190 | EMBL:AY096421 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005747 | GO:GO:0008150 | GO:GO:0016020 | RefSeq:NP_181760.1 | ProteinID:OAP10511.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31339 | PANTHER:PTHR31339:SF38 | UniProt:Q9SLC8 | UniParc:UPI000009C92F | : | : |
Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC8]
Coordinates
chr2:+:17624993..17625940
Molecular Weight (calculated)
12633.0 Da
IEP (calculated)
9.198
GRAVY (calculated)
-0.539
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTQSLTVA AKTLRNRIFS RSGSTSAGPS RWATPGHEER PKGYFMNRTP PAPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLATAG DSSD
101: LEMEKLATAG DSSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.