Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14824 | Canola | plastid | 55.56 | 98.21 |
| CDY47963 | Canola | cytosol | 97.98 | 97.98 |
| Bra000255.1-P | Field mustard | cytosol, golgi, plastid | 32.32 | 96.97 |
| Bra004680.1-P | Field mustard | mitochondrion | 50.0 | 87.61 |
| Os08t0505001-01 | Rice | mitochondrion | 31.82 | 63.64 |
| Zm00001d020930_P001 | Maize | mitochondrion | 36.87 | 63.48 |
| HORVU5Hr1G073100.1 | Barley | mitochondrion | 37.88 | 63.03 |
| EER99083 | Sorghum | mitochondrion | 36.36 | 62.61 |
| VIT_08s0007g07900.t01 | Wine grape | mitochondrion | 35.35 | 62.5 |
| TraesCS5A01G264300.1 | Wheat | mitochondrion | 37.37 | 62.18 |
| TraesCS5B01G263600.1 | Wheat | mitochondrion | 37.37 | 62.18 |
| PGSC0003DMT400032969 | Potato | mitochondrion | 34.34 | 61.82 |
| Solyc02g085540.1.1 | Tomato | mitochondrion | 34.34 | 61.82 |
| TraesCS5D01G271800.1 | Wheat | mitochondrion | 36.87 | 61.34 |
| Zm00001d031431_P001 | Maize | mitochondrion | 36.36 | 60.0 |
| KRH71875 | Soybean | plastid | 38.38 | 59.38 |
| Os09t0487500-01 | Rice | mitochondrion | 34.85 | 58.97 |
| EES14275 | Sorghum | mitochondrion | 36.87 | 58.87 |
| KRH33026 | Soybean | plastid | 37.88 | 57.69 |
| GSMUA_Achr7P02050_001 | Banana | endoplasmic reticulum, extracellular | 37.88 | 38.66 |
Protein Annotations
Description
AT2G42310 (E=3e-042) | unknown protein
Coordinates
chrA04:+:17757768..17759257
Molecular Weight (calculated)
21728.6 Da
IEP (calculated)
9.193
GRAVY (calculated)
-0.561
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKTASVAMD KEVVPLPVVN KDEKSRLDPT AVREAIAVIL AQSKLRSKNE PTQVLVEHDS PAGDGSKPNS HFVTFTSDRS HTPQRSMPST QSLTVAARSL
101: RSRILSRSGS TSAGASRWAT PGHEERPKGF FMNRTPPPPG QSRKWEDWEL PCYVTSFLTI VILGVGLNAK PDLSIETWAH QKALERLEAE RLAGDSSD
101: RSRILSRSGS TSAGASRWAT PGHEERPKGF FMNRTPPPPG QSRKWEDWEL PCYVTSFLTI VILGVGLNAK PDLSIETWAH QKALERLEAE RLAGDSSD
001: MPSTQSLTVA AKTLRNRIFS RSGSTSAGPS RWATPGHEER PKGYFMNRTP PAPGQSRKWE DWELPCYITS FLTIVILGVG LNAKPDLSIE TWAHQKALER
101: LEMEKLATAG DSSD
101: LEMEKLATAG DSSD
Arabidopsis Description
ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein [Source:UniProtKB/TrEMBL;Acc:Q9SLC8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.