Factsheet for GSMUA_Achr11P16110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	29.31	80.95
TraesCS4D01G182200.1	Wheat	mitochondrion, plastid	72.41	78.75
HORVU4Hr1G052890.1	Barley	mitochondrion	48.28	77.06
Os03t0313000-01	Rice	mitochondrion, plastid	76.44	76.88
Zm00001d028918_P001	Maize	mitochondrion	74.71	75.14
TraesCS4B01G180700.1	Wheat	golgi	74.71	75.14
EER94961	Sorghum	mitochondrion	74.71	75.14
TraesCS4A01G123600.1	Wheat	mitochondrion	74.14	74.57
CDY51827	Canola	mitochondrion	70.11	71.76
CDY56161	Canola	mitochondrion	70.11	71.76
Bra029106.1-P	Field mustard	mitochondrion	70.11	71.76
CDY50398	Canola	mitochondrion	69.54	71.6
VIT_16s0050g01490.t01	Wine grape	mitochondrion	68.97	71.01
AT5G52840.1	Thale cress	mitochondrion	68.97	71.01
Bra003109.1-P	Field mustard	mitochondrion	68.97	71.01
CDY27044	Canola	mitochondrion	68.39	70.41
KRH38334	Soybean	mitochondrion	66.67	69.88
Bra022613.1-P	Field mustard	mitochondrion	67.82	69.82
CDX96158	Canola	mitochondrion	64.94	69.33
CDY49161	Canola	mitochondrion	47.7	66.4
Solyc03g007660.2.1	Tomato	plastid	66.09	66.09
HORVU4Hr1G052900.7	Barley	mitochondrion	74.71	64.68
Solyc06g036350.2.1	Tomato	nucleus	63.79	63.43
PGSC0003DMT400074367	Potato	mitochondrion	63.22	62.86
AT4G28005.1	Thale cress	mitochondrion	37.93	57.39

Protein Annotations

MapMan:2.4.1.4.1.2	InterPro:ETC_CI_29_9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016651	GO:GO:0022904	EnsemblPlantsGene:GSMUA_Achr11G16110_001
EnsemblPlants:GSMUA_Achr11P16110_001	EnsemblPlants:GSMUA_Achr11T16110_001	UniProt:M0RSP1	PFAM:PF04716	PANTHER:PTHR12653	UniParc:UPI000296462F
SEG:seg	:	:	:	:	:

Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr11G16110_001]

Coordinates

chr11:+:17818407..17823804

Molecular Weight (calculated)

19911.0 Da

IEP (calculated)

4.561

GRAVY (calculated)

-0.494

Length

174 amino acids

Sequence
(BLAST)

001: MFLRRVMLRG GMGAMMMQAA KKVKETTGIV GLDVVPNARE VLVSLYTRTL KEIQAVPQDE GYRKAVESFT RHRLQVCQEE EDWEAIEKRL GCGQVEELIE
101: EAQDELKLIG KMIEWEPWGV PEDYECELIE DDTSIPKHVP QHRPCQLPEE FFKTLEAVST ESVPKNEPAP QVKA

Best Arabidopsis Sequence Match ( AT5G52840.1 )
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE QFYKTLEGLI AESKTEIPAA TPSDPQLKE

Arabidopsis Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.