CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029106.1-P	Field mustard	mitochondrion	98.82	98.82
CDY51827	Canola	mitochondrion	98.82	98.82
CDY27044	Canola	mitochondrion	95.29	95.86
CDY50398	Canola	mitochondrion	95.29	95.86
CDX96158	Canola	mitochondrion	91.76	95.71
CDY49161	Canola	mitochondrion	69.41	94.4
AT5G52840.1	Thale cress	mitochondrion	92.94	93.49
KRH38334	Soybean	mitochondrion	78.24	80.12
VIT_16s0050g01490.t01	Wine grape	mitochondrion	77.65	78.11
TraesCS4D01G182200.1	Wheat	mitochondrion, plastid	69.41	73.75
Solyc03g007660.2.1	Tomato	plastid	75.29	73.56
AT4G28005.1	Thale cress	mitochondrion	49.41	73.04
Solyc06g036350.2.1	Tomato	nucleus	74.71	72.57
PGSC0003DMT400074367	Potato	mitochondrion	73.53	71.43
GSMUA_Achr11P...	Banana	mitochondrion	71.76	70.11
TraesCS4B01G180700.1	Wheat	golgi	70.59	69.36
Zm00001d028918_P001	Maize	mitochondrion	69.41	68.21
TraesCS4A01G123600.1	Wheat	mitochondrion	69.41	68.21
Os03t0313000-01	Rice	mitochondrion, plastid	69.41	68.21
EER94961	Sorghum	mitochondrion	69.41	68.21
HORVU4Hr1G052890.1	Barley	mitochondrion	43.53	67.89
HORVU4Hr1G052900.7	Barley	mitochondrion	70.59	59.7

Protein Annotations

MapMan:2.4.1.4.1.2	GO:A0A078IZS6	UniProt:A0A078IZS6	EnsemblPlants:CDY56161	ProteinID:CDY56161	ProteinID:CDY56161.1
InterPro:ETC_CI_29_9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016651	GO:GO:0022904	EnsemblPlantsGene:GSBRNA2T00017890001	PFAM:PF04716
PANTHER:PTHR12653	UniParc:UPI0004EEE83D	:	:	:	:

Description

BnaA03g12510DBnaA03g12510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZS6]

Coordinates

chrLK033464:+:26105..28137

Molecular Weight (calculated)

19233.9 Da

IEP (calculated)

4.470

GRAVY (calculated)

-0.447

Length

170 amino acids

Sequence
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRHRLNVCKE EEDWEAIEKR LGCGQVEELI EEAQDELTLI
101: AKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE DFYRTLEALI SESKTKIPAA ATSTDPQLKE

Best Arabidopsis Sequence Match ( AT5G52840.1 )
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE QFYKTLEGLI AESKTEIPAA TPSDPQLKE

Arabidopsis Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.