Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50398 | Canola | mitochondrion | 98.4 | 72.78 |
| Bra003109.1-P | Field mustard | mitochondrion | 97.6 | 72.19 |
| AT4G28005.1 | Thale cress | mitochondrion | 64.8 | 70.43 |
| CDX96158 | Canola | mitochondrion | 91.2 | 69.94 |
| CDY51827 | Canola | mitochondrion | 94.4 | 69.41 |
| CDY56161 | Canola | mitochondrion | 94.4 | 69.41 |
| CDY27044 | Canola | mitochondrion | 92.0 | 68.05 |
| AT5G52840.1 | Thale cress | mitochondrion | 89.6 | 66.27 |
| VIT_16s0050g01490.t01 | Wine grape | mitochondrion | 73.6 | 54.44 |
| KRH38334 | Soybean | mitochondrion | 72.0 | 54.22 |
| Solyc03g007660.2.1 | Tomato | plastid | 72.0 | 51.72 |
| TraesCS4D01G182200.1 | Wheat | mitochondrion, plastid | 65.6 | 51.25 |
| Solyc06g036350.2.1 | Tomato | nucleus | 71.2 | 50.86 |
| PGSC0003DMT400074367 | Potato | mitochondrion | 68.8 | 49.14 |
| GSMUA_Achr11P... | Banana | mitochondrion | 66.4 | 47.7 |
| TraesCS4B01G180700.1 | Wheat | golgi | 65.6 | 47.4 |
| TraesCS4A01G123600.1 | Wheat | mitochondrion | 65.6 | 47.4 |
| Zm00001d028918_P001 | Maize | mitochondrion | 62.4 | 45.09 |
| Os03t0313000-01 | Rice | mitochondrion, plastid | 62.4 | 45.09 |
| EER94961 | Sorghum | mitochondrion | 62.4 | 45.09 |
| HORVU4Hr1G052900.7 | Barley | mitochondrion | 65.6 | 40.8 |
| HORVU4Hr1G052890.1 | Barley | mitochondrion | 33.6 | 38.53 |
Protein Annotations
| EnsemblPlants:CDY49161 | EnsemblPlantsGene:GSBRNA2T00092419001 | PANTHER:PTHR12653 | ProteinID:CDY49161 | ProteinID:CDY49161.1 | UniParc:UPI0004EEF6DE |
| UniProt:A0A078IGL6 | MapMan:2.4.1.4.1.2 | : | : | : | : |
Description
BnaA10g06250DBnaA10g06250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGL6]
Coordinates
chrLK032814:+:14621..16201
Molecular Weight (calculated)
14138.8 Da
IEP (calculated)
4.146
GRAVY (calculated)
-0.458
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLRSIGRPL LAKVKQTTGI VGLDVEEEDW EAIEKRLGCG QVEELIEEAQ DELTLIGKMI EWDPWVVPDD YECEVIENDA PIPKHVPQHR PGPLPEDFYR
101: TLEGLISESK TKIPAASSTD PLLKE
101: TLEGLISESK TKIPAASSTD PLLKE
001: MFQRVIGRPL LAKVKQTTGI VEVCPEEEDW GVIEKRLACG KVEELIEEAS DELTLVGKMI GSLHPNLILA PIPKHVPHHR PGPLPEEFYR TLQAVNSESK
101: TEITATSSSD PQLKE
101: TEITATSSSD PQLKE
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 ( /.../: NCBI BLink). [Source:TAIR;Acc:AT4G28005]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.