Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G182200.1 | Wheat | mitochondrion, plastid | 95.41 | 65.0 |
| TraesCS4B01G180700.1 | Wheat | golgi | 95.41 | 60.12 |
| TraesCS4A01G123600.1 | Wheat | mitochondrion | 94.5 | 59.54 |
| Os03t0313000-01 | Rice | mitochondrion, plastid | 88.99 | 56.07 |
| EER94961 | Sorghum | mitochondrion | 87.16 | 54.91 |
| Zm00001d028918_P001 | Maize | mitochondrion | 85.32 | 53.76 |
| HORVU4Hr1G052900.7 | Barley | mitochondrion | 97.25 | 52.74 |
| GSMUA_Achr11P... | Banana | mitochondrion | 77.06 | 48.28 |
| Bra003109.1-P | Field mustard | mitochondrion | 69.72 | 44.97 |
| VIT_16s0050g01490.t01 | Wine grape | mitochondrion | 69.72 | 44.97 |
| CDY50398 | Canola | mitochondrion | 68.81 | 44.38 |
| Solyc03g007660.2.1 | Tomato | plastid | 70.64 | 44.25 |
| Bra029106.1-P | Field mustard | mitochondrion | 68.81 | 44.12 |
| AT5G52840.1 | Thale cress | mitochondrion | 67.89 | 43.79 |
| CDY51827 | Canola | mitochondrion | 67.89 | 43.53 |
| CDY56161 | Canola | mitochondrion | 67.89 | 43.53 |
| KRH38334 | Soybean | mitochondrion | 66.06 | 43.37 |
| CDY27044 | Canola | mitochondrion | 66.97 | 43.2 |
| Bra022613.1-P | Field mustard | mitochondrion | 66.06 | 42.6 |
| PGSC0003DMT400074367 | Potato | mitochondrion | 67.89 | 42.29 |
| Solyc06g036350.2.1 | Tomato | nucleus | 66.97 | 41.71 |
| CDX96158 | Canola | mitochondrion | 61.47 | 41.1 |
| CDY49161 | Canola | mitochondrion | 38.53 | 33.6 |
| AT4G28005.1 | Thale cress | mitochondrion | 33.95 | 32.17 |
Protein Annotations
| MapMan:2.4.1.4.1.2 | UniProt:A0A287P2E0 | InterPro:ETC_CI_29_9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016651 | GO:GO:0022904 |
| EnsemblPlantsGene:HORVU4Hr1G052890 | EnsemblPlants:HORVU4Hr1G052890.1 | PFAM:PF04716 | PANTHER:PTHR12653 | UniParc:UPI000B46A4CD | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:-:439843025..439846327
Molecular Weight (calculated)
12290.9 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.287
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLRRILSGG GGLAALRSAR AVKETTGIVG LDVVPEARDV LIGLYTRTLK EIEAVPKDEG YRKAVESFAR RRLQICQEEE DWKRIEDRLG CGQVEELIEE
101: AQYELKLIG
101: AQYELKLIG
001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIGSYSRC LYRLRTIGI
101: GKMIGSYSRC LYRLRTIGI
Arabidopsis Description
Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.