Factsheet for HORVU4Hr1G052900.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G180700.1	Wheat	golgi	84.58	98.27
HORVU4Hr1G052890.1	Barley	mitochondrion	52.74	97.25
TraesCS4A01G123600.1	Wheat	mitochondrion	83.58	97.11
TraesCS4D01G182200.1	Wheat	mitochondrion, plastid	77.11	96.88
Os03t0313000-01	Rice	mitochondrion, plastid	79.1	91.91
EER94961	Sorghum	mitochondrion	78.61	91.33
Zm00001d028918_P001	Maize	mitochondrion	77.11	89.6
GSMUA_Achr11P...	Banana	mitochondrion	64.68	74.71
CDY56161	Canola	mitochondrion	59.7	70.59
Bra029106.1-P	Field mustard	mitochondrion	59.7	70.59
Bra003109.1-P	Field mustard	mitochondrion	59.2	70.41
CDY50398	Canola	mitochondrion	58.71	69.82
AT5G52840.1	Thale cress	mitochondrion	58.71	69.82
CDY51827	Canola	mitochondrion	58.71	69.41
VIT_16s0050g01490.t01	Wine grape	mitochondrion	58.21	69.23
CDY27044	Canola	mitochondrion	57.71	68.64
CDX96158	Canola	mitochondrion	55.22	68.1
KRH38334	Soybean	mitochondrion	56.22	68.07
Bra022613.1-P	Field mustard	mitochondrion	57.21	68.05
CDY49161	Canola	mitochondrion	40.8	65.6
Solyc03g007660.2.1	Tomato	plastid	56.22	64.94
PGSC0003DMT400074367	Potato	mitochondrion	54.23	62.29
Solyc06g036350.2.1	Tomato	nucleus	54.23	62.29
AT4G28005.1	Thale cress	mitochondrion	32.34	56.52

Protein Annotations

MapMan:2.4.1.4.1.2	UniProt:A0A287P2M4	InterPro:ETC_CI_29_9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016651	GO:GO:0022904
EnsemblPlantsGene:HORVU4Hr1G052900	EnsemblPlants:HORVU4Hr1G052900.7	PFAM:PF04716	PANTHER:PTHR12653	UniParc:UPI000B487634	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:440026441..440029594

Molecular Weight (calculated)

22743.9 Da

IEP (calculated)

4.654

GRAVY (calculated)

-0.662

Length

201 amino acids

Sequence
(BLAST)

001: TRTVAPHRHL TLPQRERERE SEEEDGGGMF LRRILSGGGG LAALRSARAV KETTGIVGLD VVPEARDVLI GLYTRTLKEI EAVPKDEGYR KAVESFTRHR
101: LQICQEEEDW KRIEDRLGCG QVEELIEEAQ DELKLIGKMI EWDPWGVPDD YECEVIEDNT PIPKHVPQHR PVALPEEFFK TLDAIKSDPA LQGDSPPQVK
201: S

Best Arabidopsis Sequence Match ( AT5G52840.1 )
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE QFYKTLEGLI AESKTEIPAA TPSDPQLKE

Arabidopsis Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.