CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022613.1-P	Field mustard	mitochondrion	99.41	99.41
CDX96158	Canola	mitochondrion	93.49	96.93
CDY51827	Canola	mitochondrion	95.86	95.29
CDY56161	Canola	mitochondrion	95.86	95.29
CDY50398	Canola	mitochondrion	94.08	94.08
CDY49161	Canola	mitochondrion	68.05	92.0
AT5G52840.1	Thale cress	mitochondrion	91.12	91.12
KRH38334	Soybean	mitochondrion	77.51	78.92
VIT_16s0050g01490.t01	Wine grape	mitochondrion	75.15	75.15
Solyc03g007660.2.1	Tomato	plastid	75.15	72.99
TraesCS4D01G182200.1	Wheat	mitochondrion, plastid	68.64	72.5
Solyc06g036350.2.1	Tomato	nucleus	74.56	72.0
PGSC0003DMT400074367	Potato	mitochondrion	73.37	70.86
AT4G28005.1	Thale cress	mitochondrion	47.93	70.43
GSMUA_Achr11P...	Banana	mitochondrion	70.41	68.39
TraesCS4B01G180700.1	Wheat	golgi	68.64	67.05
HORVU4Hr1G052890.1	Barley	mitochondrion	43.2	66.97
Zm00001d028918_P001	Maize	mitochondrion	68.05	66.47
EER94961	Sorghum	mitochondrion	68.05	66.47
TraesCS4A01G123600.1	Wheat	mitochondrion	67.46	65.9
Os03t0313000-01	Rice	mitochondrion, plastid	67.46	65.9
HORVU4Hr1G052900.7	Barley	mitochondrion	68.64	57.71

Protein Annotations

MapMan:2.4.1.4.1.2	GO:A0A078GPB9	UniProt:A0A078GPB9	EnsemblPlants:CDY27044	ProteinID:CDY27044	ProteinID:CDY27044.1
InterPro:ETC_CI_29_9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016651	GO:GO:0022904	EnsemblPlantsGene:GSBRNA2T00036857001	PFAM:PF04716
PANTHER:PTHR12653	UniParc:UPI0004EF36AA	:	:	:	:

Description

BnaA02g10640DBnaA02g10640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPB9]

Coordinates

chrLK032199:-:180795..182730

Molecular Weight (calculated)

19076.7 Da

IEP (calculated)

4.470

GRAVY (calculated)

-0.478

Length

169 amino acids

Sequence
(BLAST)

001: MFLRAIGRPL LAKAKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRHRLNVCKE EEDWEAIEKR LGCGQVEELI EEAQDELTLI
101: AKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE DFYRTLEGLL SESKTKIPAA SSADPQLEK

Best Arabidopsis Sequence Match ( AT5G52840.1 )
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIEWDPWG VPDDYECEVI ENDAPIPKHV PQHRPGPLPE QFYKTLEGLI AESKTEIPAA TPSDPQLKE

Arabidopsis Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.