Factsheet for Zm00001d028918_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94961	Sorghum	mitochondrion	95.38	95.38
Os03t0313000-01	Rice	mitochondrion, plastid	92.49	92.49
TraesCS4B01G180700.1	Wheat	golgi	90.75	90.75
TraesCS4D01G182200.1	Wheat	mitochondrion, plastid	83.24	90.0
TraesCS4A01G123600.1	Wheat	mitochondrion	89.02	89.02
HORVU4Hr1G052890.1	Barley	mitochondrion	53.76	85.32
HORVU4Hr1G052900.7	Barley	mitochondrion	89.6	77.11
GSMUA_Achr11P...	Banana	mitochondrion	75.14	74.71
CDY56161	Canola	mitochondrion	68.21	69.41
Bra029106.1-P	Field mustard	mitochondrion	67.05	68.24
CDY51827	Canola	mitochondrion	67.05	68.24
VIT_16s0050g01490.t01	Wine grape	mitochondrion	66.47	68.05
CDY27044	Canola	mitochondrion	66.47	68.05
CDX96158	Canola	mitochondrion	63.58	67.48
KRH38334	Soybean	mitochondrion	64.74	67.47
Bra022613.1-P	Field mustard	mitochondrion	65.9	67.46
Bra003109.1-P	Field mustard	mitochondrion	65.9	67.46
AT5G52840.1	Thale cress	mitochondrion	65.9	67.46
CDY50398	Canola	mitochondrion	65.32	66.86
Solyc03g007660.2.1	Tomato	plastid	64.74	64.37
PGSC0003DMT400074367	Potato	mitochondrion	63.58	62.86
Solyc06g036350.2.1	Tomato	nucleus	63.58	62.86
CDY49161	Canola	mitochondrion	45.09	62.4
AT4G28005.1	Thale cress	mitochondrion	35.84	53.91

Protein Annotations

MapMan:2.4.1.4.1.2	UniProt:A0A1D6K0T8	ncoils:Coil	InterPro:ETC_CI_29_9	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016651
GO:GO:0022904	ProteinID:ONL97392.1	PFAM:PF04716	PANTHER:PTHR12653	UniParc:UPI000221E65A	EnsemblPlantsGene:Zm00001d028918
EnsemblPlants:Zm00001d028918_P001	EnsemblPlants:Zm00001d028918_T001	SEG:seg	:	:	:

Description

NADH ubiquinone oxidoreductase1 NADH ubiquinone oxidoreductase1

Coordinates

chr1:+:51462257..51464279

Molecular Weight (calculated)

19384.1 Da

IEP (calculated)

4.400

GRAVY (calculated)

-0.396

Length

173 amino acids

Sequence
(BLAST)

001: MFLRRILTGG GGLAALRAAR AVKETTGIVG LEVVPNAREV LVGLYERTLK EIKAVPEDEG YRKAVESFTG HRLQICQEEE DWKRIEDRIG CGQVEELIEE
101: AEDELKLIAK MIEWDPWGVP DDYECEVIED DTPIPKHVPQ HRPVALPEEF FKALDAVKSD PALQGDAPPQ VKA

Best Arabidopsis Sequence Match ( AT5G52840.2 )
(BLAST)

001: MFLRAIGRPL LAKVKQTTGI VGLDVVPNAR AVLIDLYSKT LKEIQAVPED EGYRKAVESF TRQRLNVCKE EEDWEMIEKR LGCGQVEELI EEARDELTLI
101: GKMIGSYSRC LYRLRTIGI

Arabidopsis Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.