Factsheet for GSMUA_AchrUn_randomP05630_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58150	Barley	plasma membrane	87.89	87.89
BAV58160	Barley	cytosol	87.89	87.89
HORVU3Hr1G115130.1	Barley	cytosol	87.89	87.89
HORVU2Hr1G086590.1	Barley	cytosol	87.89	87.89
BAC19900	Rice	mitochondrion, plastid	87.37	87.37
TraesCSU01G270500.1	Wheat	cytosol	87.37	87.37
TraesCS6D01G150700.1	Wheat	golgi, plastid, unclear	87.37	87.37
TraesCS4A01G070100.1	Wheat	cytosol	87.37	87.37
TraesCS2B01G146500.1	Wheat	cytosol	87.37	87.37
TraesCS4A01G241800.1	Wheat	cytosol	86.84	86.84
TraesCSU01G249400.1	Wheat	cytosol	86.84	86.84
TraesCSU01G225300.1	Wheat	cytosol	86.84	86.84
TraesCS7D01G300700.1	Wheat	cytosol	86.84	86.84
TraesCS7B01G458400.1	Wheat	cytosol	86.84	86.84
TraesCS7B01G457900.1	Wheat	cytosol	86.84	86.84
TraesCS1B01G458700.1	Wheat	cytosol	86.84	86.84
GRMZM5G839924_P01	Maize	plastid	86.84	86.84
TraesCS7A01G098700.1	Wheat	cytosol	86.32	86.77
HORVU1Hr1G037960.1	Barley	cytosol	86.32	86.32
TraesCS6D01G201100.1	Wheat	cytosol	86.32	86.32
TraesCS2B01G282700.1	Wheat	cytosol	86.32	86.32
TraesCS7B01G487500.1	Wheat	cytosol	86.32	86.32
TraesCS1D01G193000.1	Wheat	cytosol	85.79	85.79
TraesCS4A01G145000.1	Wheat	cytosol	85.79	85.79
TraesCS6B01G216400.1	Wheat	cytosol	85.79	85.79
TraesCS3B01G564800.1	Wheat	cytosol	85.26	85.26
TraesCS4D01G137500.1	Wheat	cytosol	85.26	85.26
ATMG00070.1	Thale cress	cytosol	84.74	84.74
TraesCS6D01G317000.1	Wheat	cytosol	84.21	84.21
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	87.89	83.08
Os12t0422971-00	Rice	mitochondrion	44.74	74.56
CDY17574	Canola	cytosol	14.21	72.97
CDY45537	Canola	mitochondrion	84.74	71.88
Solyc01g020470.1.1	Tomato	cytosol	39.47	68.18
PGSC0003DMT400053837	Potato	cytosol	25.79	68.06
Solyc08g029250.1.1	Tomato	cytosol, mitochondrion	40.53	65.25
Solyc03g061560.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid, unclear	48.95	62.84
Solyc08g065620.1.1	Tomato	mitochondrion, plasma membrane, plastid	45.79	53.37
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	14.74	49.12

Protein Annotations

MapMan:2.4.1.2.2	Gene3D:3.30.460.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0016651	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG05630_001	EnsemblPlants:GSMUA_AchrUn_randomP05630_001	EnsemblPlants:GSMUA_AchrUn_randomT05630_001
InterPro:IPR037232	UniProt:M0U6M4	HAMAP:MF_01357	InterPro:NADH_DH_suC	InterPro:NADH_UbQ_OxRdtase_30kDa_su	InterPro:NADH_quin_OxRdtase_su_C/D-like
PFAM:PD001581	PFAM:PF00329	PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	SUPFAM:SSF143243	UniParc:UPI000295703A

Description

NADH-ubiquinone oxidoreductase 27 kDa subunit [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05630_001]

Coordinates

chrchrUn_random:+:23250612..23251184

Molecular Weight (calculated)

22432.3 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.575

Length

190 amino acids

Sequence
(BLAST)

001: MDNQFILQYC WYILPKKWVN QIQRSSHGNR SLTNTDSLFP LLCFLKWHTY TRVQVSIDIC GVDHPSRKHR FEVVHNLLST RYNSRICVQT SADEVTRIST
101: VVSLFPSAGW WEREVWDMSG VSSINHPDLR RISTDHGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEYRYFDS ASPWEQCSDR

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.