CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G115130.1	Barley	cytosol	100.0	100.0
BAV58150	Barley	plasma membrane	100.0	100.0
HORVU2Hr1G086590.1	Barley	cytosol	100.0	100.0
TraesCSU01G270500.1	Wheat	cytosol	99.47	99.47
BAC19900	Rice	mitochondrion, plastid	99.47	99.47
GRMZM5G839924_P01	Maize	plastid	98.95	98.95
HORVU1Hr1G037960.1	Barley	cytosol	98.42	98.42
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	100.0	94.53
ATMG00070.1	Thale cress	cytosol	92.11	92.11
GSMUA_AchrUn_...	Banana	plastid	87.89	87.89
Os12t0422971-00	Rice	mitochondrion	48.42	80.7
CDY45537	Canola	mitochondrion	93.16	79.02
CDY17574	Canola	cytosol	15.26	78.38
Solyc01g020470.1.1	Tomato	cytosol	44.74	77.27
PGSC0003DMT400053837	Potato	cytosol	27.37	72.22
Solyc03g061560.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid, unclear	53.16	68.24
Solyc08g029250.1.1	Tomato	cytosol, mitochondrion	42.11	67.8
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	20.0	66.67
Solyc08g065620.1.1	Tomato	mitochondrion, plasma membrane, plastid	48.42	56.44

Protein Annotations

MapMan:2.4.1.2.2	Gene3D:3.30.460.80	ProteinID:ANI86443.1	ENA:AP017301.1:CDS:524211..524783	ProteinID:BAV58150.1	EnsemblPlants:BAV58160
ProteinID:BAV58160	ProteinID:BAV58160.1	EnsemblPlantsGene:EPlHVUG00000039880	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:IPR037232	GO:M0Z344	UniProt:M0Z344	InterPro:NADH_UbQ_OxRdtase_30kDa_su
InterPro:NADH_quin_OxRdtase_su_C/D-like	PFAM:PD001581	PFAM:PF00329	PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	SUPFAM:SSF143243
UniParc:UPI0002052E5B	:	:	:	:	:

Description

nad9_1NADH dehydrogenase subunit 9

Coordinates

chrMt:+:524211..524783

Molecular Weight (calculated)

22611.6 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.748

Length

190 amino acids

Sequence
(BLAST)

001: MDNQSIFQYS WEILPKKWVH KMKRSEHGNR SYTNTDYPFP LLCFLKWHTY TRVQVSIDIC GVDHPSRKRR FEVVHNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMSG VSSINHPDLR RISTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.