Factsheet for Solyc08g065620.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, plasma membrane, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053837	Potato	cytosol	34.97	79.17
Solyc03g061560.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid, unclear	55.83	61.49
Solyc01g020470.1.1	Tomato	cytosol	37.42	55.45
ATMG00070.1	Thale cress	cytosol	59.51	51.05
TraesCS7A01G098700.1	Wheat	cytosol	56.44	48.68
TraesCS4A01G070100.1	Wheat	cytosol	56.44	48.42
TraesCS2B01G146500.1	Wheat	cytosol	56.44	48.42
TraesCS1B01G458700.1	Wheat	cytosol	56.44	48.42
TraesCS6D01G201100.1	Wheat	cytosol	56.44	48.42
TraesCS7B01G457900.1	Wheat	cytosol	56.44	48.42
HORVU3Hr1G115130.1	Barley	cytosol	56.44	48.42
HORVU2Hr1G086590.1	Barley	cytosol	56.44	48.42
HORVU1Hr1G037960.1	Barley	cytosol	56.44	48.42
TraesCS7B01G458400.1	Wheat	cytosol	56.44	48.42
TraesCSU01G225300.1	Wheat	cytosol	56.44	48.42
TraesCSU01G249400.1	Wheat	cytosol	56.44	48.42
BAV58160	Barley	cytosol	56.44	48.42
BAV58150	Barley	plasma membrane	56.44	48.42
TraesCSU01G270500.1	Wheat	cytosol	55.83	47.89
TraesCS6D01G150700.1	Wheat	golgi, plastid, unclear	55.83	47.89
TraesCS4D01G137500.1	Wheat	cytosol	55.83	47.89
BAC19900	Rice	mitochondrion, plastid	55.83	47.89
GRMZM5G839924_P01	Maize	plastid	55.83	47.89
Solyc08g029250.1.1	Tomato	cytosol, mitochondrion	34.36	47.46
TraesCS2B01G282700.1	Wheat	cytosol	55.21	47.37
TraesCS4A01G145000.1	Wheat	cytosol	55.21	47.37
TraesCS4A01G241800.1	Wheat	cytosol	55.21	47.37
TraesCS7D01G300700.1	Wheat	cytosol	55.21	47.37
TraesCS1D01G193000.1	Wheat	cytosol	54.6	46.84
TraesCS6B01G216400.1	Wheat	cytosol	54.6	46.84
TraesCS3B01G564800.1	Wheat	cytosol	54.6	46.84
TraesCS7B01G487500.1	Wheat	cytosol	54.6	46.84
TraesCS6D01G317000.1	Wheat	cytosol	53.99	46.32
GSMUA_AchrUn_...	Banana	plastid	53.37	45.79
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	56.44	45.77
CDY45537	Canola	mitochondrion	60.12	43.75
Os12t0422971-00	Rice	mitochondrion	28.83	41.23
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	11.66	33.33
Solyc08g065550.1.1	Tomato	unclear	1.84	3.75

Protein Annotations

Gene3D:3.30.460.80	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006091	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0045333	GO:GO:0055114
InterPro:IPR037232	UniProt:K4CLE2	InterPro:NADH_UbQ_OxRdtase_30kDa_su	InterPro:NADH_quin_OxRdtase_su_C/D-like	PFAM:PD001581	PFAM:PF00329
PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	SUPFAM:SSF143243	EnsemblPlantsGene:Solyc08g065620.1	EnsemblPlants:Solyc08g065620.1.1	UniParc:UPI000276B6D8

Description

No Description!

Coordinates

chr8:+:53784070..53784561

Molecular Weight (calculated)

18662.2 Da

IEP (calculated)

7.385

GRAVY (calculated)

-0.342

Length

163 amino acids

Sequence
(BLAST)

001: MESPKTGAGV LDLFCFDRGT ITVSGITIIR SIALILPSLT QKRESTPQTK DECQREDAQA MERSEHGNRS DTNTDYLFQL LCFMKLHTYT RVQVSIDICG
101: VDYPSRKQKF EVVYNLLSIR YNSRIRIQTS ADEVTRISPV VSLFQSAGRW EREVWDMFGV SSH

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.