CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
ATMG00070.1	Thale cress	cytosol	83.93	98.95
BAV58150	Barley	plasma membrane	79.02	93.16
BAV58160	Barley	cytosol	79.02	93.16
GRMZM5G839924_P01	Maize	plastid	79.02	93.16
HORVU3Hr1G115130.1	Barley	cytosol	79.02	93.16
HORVU2Hr1G086590.1	Barley	cytosol	79.02	93.16
BAC19900	Rice	mitochondrion, plastid	78.57	92.63
TraesCSU01G270500.1	Wheat	cytosol	78.57	92.63
TraesCSU01G249400.1	Wheat	cytosol	78.57	92.63
TraesCS6D01G150700.1	Wheat	golgi, plastid, unclear	78.57	92.63
TraesCS4A01G070100.1	Wheat	cytosol	78.57	92.63
TraesCS7D01G300700.1	Wheat	cytosol	78.12	92.11
TraesCS7B01G458400.1	Wheat	cytosol	78.12	92.11
TraesCSU01G225300.1	Wheat	cytosol	78.12	92.11
TraesCS7B01G457900.1	Wheat	cytosol	78.12	92.11
TraesCS4A01G241800.1	Wheat	cytosol	78.12	92.11
CDY17574	Canola	cytosol	15.18	91.89
TraesCS4A01G145000.1	Wheat	cytosol	77.68	91.58
TraesCS6D01G201100.1	Wheat	cytosol	77.68	91.58
TraesCS2B01G146500.1	Wheat	cytosol	77.68	91.58
TraesCS1B01G458700.1	Wheat	cytosol	77.68	91.58
HORVU1Hr1G037960.1	Barley	cytosol	77.68	91.58
TraesCS7A01G098700.1	Wheat	cytosol	77.23	91.53
TraesCS2B01G282700.1	Wheat	cytosol	77.23	91.05
TraesCS6B01G216400.1	Wheat	cytosol	77.23	91.05
TraesCS1D01G193000.1	Wheat	cytosol	77.23	91.05
TraesCS7B01G487500.1	Wheat	cytosol	77.23	91.05
TraesCS4D01G137500.1	Wheat	cytosol	76.79	90.53
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	80.36	89.55
TraesCS6D01G317000.1	Wheat	cytosol	75.89	89.47
TraesCS3B01G564800.1	Wheat	cytosol	74.11	87.37
GSMUA_AchrUn_...	Banana	plastid	71.88	84.74
PGSC0003DMT400053837	Potato	cytosol	25.89	80.56
CDY17564	Canola	cytosol	57.59	77.71
Os12t0422971-00	Rice	mitochondrion	39.29	77.19
Solyc08g065620.1.1	Tomato	mitochondrion, plasma membrane, plastid	43.75	60.12
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	13.84	54.39

Protein Annotations

MapMan:2.4.1.2.2	Gene3D:3.30.460.80	GO:A0A078I630	UniProt:A0A078I630	EnsemblPlants:CDY45537	ProteinID:CDY45537
ProteinID:CDY45537.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016651	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00082233001	InterPro:IPR037232	HAMAP:MF_01357	InterPro:NADH_DH_suC
InterPro:NADH_UbQ_OxRdtase_30kDa_su	InterPro:NADH_UbQ_OxRdtase_CS	InterPro:NADH_quin_OxRdtase_su_C/D-like	PFAM:PD001581	PFAM:PF00329	ScanProsite:PS00542
PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	SUPFAM:SSF143243	UniParc:UPI000456DD37	:	:

Description

BnaCnng12960DBnaCnng12960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I630]

Coordinates

chrLK032627:+:180124..180798

Molecular Weight (calculated)

26666.7 Da

IEP (calculated)

9.859

GRAVY (calculated)

-0.627

Length

224 amino acids

Sequence
(BLAST)

001: MLFLVGPTGT GNFRRVFQNL KSKKRNYKKA FFIFMDNQSI FKYSWETLPK KWVKKMERSE HGNRSDTNTD YLFQLLCFLK LHTYTRVQVS IDICGVDHPS
101: RKRRFEVVYN LLSTRYNSRI RVQTSADEVT RISPVVSLFP SAGRWEREVW DMFGVSFINH PDLRRISTDY GFEGHPLRKD LPLSGYVEVR YDDPEKRVVS
201: EPIEMTQEFR YFDFASPWEQ RSDG

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.