Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g065550.1.1 | Tomato | unclear | 39.16 | 81.25 |
| PGSC0003DMT400048854 | Potato | mitochondrion | 44.58 | 62.18 |
| CDY45537 | Canola | mitochondrion | 77.71 | 57.59 |
| CDY17574 | Canola | cytosol | 2.41 | 10.81 |
Protein Annotations
| Gene3D:3.30.460.80 | MapMan:35.1 | GO:A0A078FWT9 | UniProt:A0A078FWT9 | EnsemblPlants:CDY17564 | ProteinID:CDY17564 |
| ProteinID:CDY17564.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016651 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00001747001 | InterPro:IPR037232 | InterPro:NADH_UbQ_OxRdtase_30kDa_su | InterPro:NADH_UbQ_OxRdtase_CS | InterPro:NADH_quin_OxRdtase_su_C/D-like | PFAM:PD001581 |
| PFAM:PF00329 | ScanProsite:PS00542 | PANTHER:PTHR10884 | PANTHER:PTHR10884:SF10 | SUPFAM:SSF143243 | UniParc:UPI0004EE59C3 |
Description
BnaC01g26880DNAD(P)H-quinone oxidoreductase subunit J, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A078FWT9]
Coordinates
chrLK032075:-:627596..628158
Molecular Weight (calculated)
19973.8 Da
IEP (calculated)
9.163
GRAVY (calculated)
-0.701
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNQSIFRYS WETLPKKWVK KWKDRNMGID LIPIRTTYFN CCAFSNCIPI QGFKFRSCGV DHPSRKRRFE VVNLLRTRYN SRIPGRWERE VLDMFGVSFI
101: NHPDLRRIST DYGFEGHPLR KDLLLSGYVE VRYDDPEKRV VSEPIEMTQE FRYFDFASPW EQRSDG
101: NHPDLRRIST DYGFEGHPLR KDLLLSGYVE VRYDDPEKRV VSEPIEMTQE FRYFDFASPW EQRSDG
001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
Arabidopsis Description
NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.