Factsheet for Os12t0422971-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAC19900	Rice	mitochondrion, plastid	81.58	48.95
GRMZM5G839924_P01	Maize	plastid	81.58	48.95
BAV58150	Barley	plasma membrane	80.7	48.42
BAV58160	Barley	cytosol	80.7	48.42
HORVU2Hr1G086590.1	Barley	cytosol	80.7	48.42
HORVU3Hr1G115130.1	Barley	cytosol	80.7	48.42
TraesCSU01G270500.1	Wheat	cytosol	79.82	47.89
TraesCS7B01G457900.1	Wheat	cytosol	79.82	47.89
TraesCS6D01G150700.1	Wheat	golgi, plastid, unclear	79.82	47.89
TraesCS4A01G241800.1	Wheat	cytosol	79.82	47.89
TraesCS4A01G070100.1	Wheat	cytosol	79.82	47.89
TraesCS2B01G282700.1	Wheat	cytosol	79.82	47.89
TraesCS2B01G146500.1	Wheat	cytosol	79.82	47.89
HORVU1Hr1G037960.1	Barley	cytosol	79.82	47.89
TraesCS7A01G098700.1	Wheat	cytosol	78.95	47.62
TraesCSU01G249400.1	Wheat	cytosol	78.95	47.37
TraesCSU01G225300.1	Wheat	cytosol	78.95	47.37
TraesCS7D01G300700.1	Wheat	cytosol	78.95	47.37
TraesCS7B01G487500.1	Wheat	cytosol	78.95	47.37
TraesCS1B01G458700.1	Wheat	cytosol	78.95	47.37
TraesCS7B01G458400.1	Wheat	cytosol	78.95	47.37
TraesCS6D01G317000.1	Wheat	cytosol	78.95	47.37
TraesCS6D01G201100.1	Wheat	cytosol	78.95	47.37
TraesCS4D01G137500.1	Wheat	cytosol	78.95	47.37
TraesCS6B01G216400.1	Wheat	cytosol	78.95	47.37
TraesCS1D01G193000.1	Wheat	cytosol	78.07	46.84
TraesCS4A01G145000.1	Wheat	cytosol	78.07	46.84
ATMG00070.1	Thale cress	cytosol	76.32	45.79
TraesCS3B01G564800.1	Wheat	cytosol	76.32	45.79
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	80.7	45.77
GSMUA_AchrUn_...	Banana	plastid	74.56	44.74
CDY45537	Canola	mitochondrion	77.19	39.29
Solyc01g020470.1.1	Tomato	cytosol	35.96	37.27
Solyc03g061560.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid, unclear	42.11	32.43
Solyc08g029250.1.1	Tomato	cytosol, mitochondrion	33.33	32.2
Solyc08g065620.1.1	Tomato	mitochondrion, plasma membrane, plastid	41.23	28.83
PGSC0003DMT400053837	Potato	cytosol	14.04	22.22
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	1.75	3.51
CDY17574	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os12t0422971-00	EnsemblPlantsGene:Os12g0422971	Gene3D:3.30.460.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:IPR037232	InterPro:NADH_UbQ_OxRdtase_30kDa_su	InterPro:NADH_quin_OxRdtase_su_C/D-like
PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	PFAM:PD001581	PFAM:PF00329	ProteinID:BAT16904.1	SUPFAM:SSF143243
UniParc:UPI000393AA81	UniProt:A0A0P0Y9J6	MapMan:35.1	:	:	:

Description

Similar to NADH dehydrogenase subunit 9. (Os12t0422971-00)

Coordinates

chr12:+:13355799..13356143

Molecular Weight (calculated)

13275.7 Da

IEP (calculated)

10.362

GRAVY (calculated)

-0.581

Length

114 amino acids

Sequence
(BLAST)

001: GLIDRRLRRR FEVVHNLLST QYNSRIRVQT SADEVTRISP VVSPFPSAGR WEREVWDMSG VSSINHPDLR RISTDYGFEG HPLRKDFSLS GYVEVQKFYF
101: NFSIKLKKVS DSPN

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.