Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G249400.1 | Wheat | cytosol | 96.32 | 96.32 |
| BAC19900 | Rice | mitochondrion, plastid | 95.79 | 95.79 |
| TraesCS6D01G150700.1 | Wheat | golgi, plastid, unclear | 95.79 | 95.79 |
| TraesCS1B01G458700.1 | Wheat | cytosol | 95.79 | 95.79 |
| GRMZM5G839924_P01 | Maize | plastid | 95.26 | 95.26 |
| TraesCS6D01G201100.1 | Wheat | cytosol | 95.26 | 95.26 |
| TraesCS7D01G300700.1 | Wheat | cytosol | 95.26 | 95.26 |
| TraesCS1D01G193000.1 | Wheat | cytosol | 94.21 | 94.21 |
| TraesCS4D01G137500.1 | Wheat | cytosol | 94.21 | 94.21 |
| HORVU1Hr1G025100.1 | Barley | cytosol, mitochondrion | 96.32 | 91.04 |
| ATMG00070.1 | Thale cress | cytosol | 88.42 | 88.42 |
| GSMUA_AchrUn_... | Banana | plastid | 84.21 | 84.21 |
| Os12t0422971-00 | Rice | mitochondrion | 47.37 | 78.95 |
| CDY45537 | Canola | mitochondrion | 89.47 | 75.89 |
| Solyc01g020470.1.1 | Tomato | cytosol | 42.63 | 73.64 |
| CDY17574 | Canola | cytosol | 14.21 | 72.97 |
| PGSC0003DMT400053837 | Potato | cytosol | 25.79 | 68.06 |
| Solyc03g061560.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid, unclear | 51.05 | 65.54 |
| Solyc08g029250.1.1 | Tomato | cytosol, mitochondrion | 40.53 | 65.25 |
| Solyc08g065620.1.1 | Tomato | mitochondrion, plasma membrane, plastid | 46.32 | 53.99 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G317000.1 | EnsemblPlantsGene:TraesCS6D01G317000 | Gene3D:3.30.460.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR037232 | InterPro:NADH_UbQ_OxRdtase_30kDa_su | InterPro:NADH_quin_OxRdtase_su_C/D-like |
| PANTHER:PTHR10884 | PANTHER:PTHR10884:SF10 | PFAM:PD001581 | PFAM:PF00329 | SUPFAM:SSF143243 | MapMan:2.4.1.2.2 |
Description
No Description!
Coordinates
chr6D:-:425989565..425990137
Molecular Weight (calculated)
22628.5 Da
IEP (calculated)
7.069
GRAVY (calculated)
-0.697
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNQSIFQYS WEILPKKWVH KMKRSEHGNR SYTNTDYPFP LLCYLKWHTY TRVHVSIDIC GVDHPSRKRR FEVVHNLLST WYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMSG VFSINHPDLH RISTDYGFEG HPLRKDFPLS GYVEVCHDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
101: VVSLFPSAGR WEREVWDMSG VFSINHPDLH RISTDYGFEG HPLRKDFPLS GYVEVCHDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG
Arabidopsis Description
NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.