Factsheet for Solyc08g029250.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17574	Canola	cytosol	24.58	78.38
Solyc01g020470.1.1	Tomato	cytosol	50.85	54.55
TraesCS2B01G282700.1	Wheat	cytosol	68.64	42.63
TraesCS7A01G098700.1	Wheat	cytosol	67.8	42.33
TraesCS7B01G458400.1	Wheat	cytosol	67.8	42.11
TraesCS4A01G070100.1	Wheat	cytosol	67.8	42.11
TraesCS4D01G137500.1	Wheat	cytosol	67.8	42.11
TraesCS6D01G150700.1	Wheat	golgi, plastid, unclear	67.8	42.11
TraesCS6D01G201100.1	Wheat	cytosol	67.8	42.11
TraesCS7B01G457900.1	Wheat	cytosol	67.8	42.11
TraesCS7B01G487500.1	Wheat	cytosol	67.8	42.11
HORVU3Hr1G115130.1	Barley	cytosol	67.8	42.11
HORVU2Hr1G086590.1	Barley	cytosol	67.8	42.11
TraesCSU01G225300.1	Wheat	cytosol	67.8	42.11
TraesCSU01G249400.1	Wheat	cytosol	67.8	42.11
BAV58160	Barley	cytosol	67.8	42.11
BAV58150	Barley	plasma membrane	67.8	42.11
TraesCSU01G270500.1	Wheat	cytosol	66.95	41.58
TraesCS7D01G300700.1	Wheat	cytosol	66.95	41.58
BAC19900	Rice	mitochondrion, plastid	66.95	41.58
TraesCS4A01G241800.1	Wheat	cytosol	66.95	41.58
TraesCS4A01G145000.1	Wheat	cytosol	66.95	41.58
TraesCS2B01G146500.1	Wheat	cytosol	66.95	41.58
TraesCS1D01G193000.1	Wheat	cytosol	66.95	41.58
TraesCS1B01G458700.1	Wheat	cytosol	66.95	41.58
HORVU1Hr1G037960.1	Barley	cytosol	66.95	41.58
GRMZM5G839924_P01	Maize	plastid	66.95	41.58
TraesCS3B01G564800.1	Wheat	cytosol	66.1	41.05
TraesCS6B01G216400.1	Wheat	cytosol	66.1	41.05
Solyc03g061560.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid, unclear	50.85	40.54
TraesCS6D01G317000.1	Wheat	cytosol	65.25	40.53
GSMUA_AchrUn_...	Banana	plastid	65.25	40.53
HORVU1Hr1G025100.1	Barley	cytosol, mitochondrion	67.8	39.8
Solyc08g065620.1.1	Tomato	mitochondrion, plasma membrane, plastid	47.46	34.36
Os12t0422971-00	Rice	mitochondrion	32.2	33.33
Solyc08g065550.1.1	Tomato	unclear	21.19	31.25
HORVU7Hr1G074160.1	Barley	cytosol, mitochondrion	12.71	26.32

Protein Annotations

Gene3D:3.30.460.80	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006091	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0045333	GO:GO:0055114
InterPro:IPR037232	UniProt:K4CJY7	InterPro:NADH_UbQ_OxRdtase_30kDa_su	InterPro:NADH_quin_OxRdtase_su_C/D-like	PFAM:PD001581	PFAM:PF00329
PANTHER:PTHR10884	PANTHER:PTHR10884:SF10	SUPFAM:SSF143243	EnsemblPlantsGene:Solyc08g029250.1	EnsemblPlants:Solyc08g029250.1.1	UniParc:UPI000276C055

Description

No Description!

Coordinates

chr8:-:37210225..37210679

Molecular Weight (calculated)

14040.8 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.363

Length

118 amino acids

Sequence
(BLAST)

001: MKWVKKRERS KHGNRYDTNM DYLFQLLCFL KLHTYTRVNV STDIYEVTQI SPVVSLFPSA DRWEREVLDM FCVSSINHPE YTPNINKLLF RWSSITKDLP
101: LSGYVEVHYD DLEKCVVS

Best Arabidopsis Sequence Match ( ATMG00070.1 )
(BLAST)

001: MDNQFIFKYS WETLPKKWVK KMERSEHGNR SDTNTDYLFQ LLCFLKLHTY TRVQVSIDIC GVDHPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISP
101: VVSLFPSAGR WEREVWDMFG VSFINHPDLR RISTDYGFEG HPLRKDLPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG

Arabidopsis Description

NAD9NADH dehydrogenase subunit 9 [Source:TAIR;Acc:ATMG00070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.