Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03003 | Sorghum | cytosol | 66.42 | 67.42 |
| KRH13331 | Soybean | mitochondrion | 65.67 | 67.18 |
| Solyc01g022750.2.1 | Tomato | plastid | 64.93 | 65.91 |
| KRH20678 | Soybean | endoplasmic reticulum | 64.18 | 65.65 |
| Bra001444.1-P | Field mustard | mitochondrion | 64.93 | 65.41 |
| VIT_13s0084g00610.t01 | Wine grape | cytosol | 64.93 | 65.41 |
| CDY00763 | Canola | mitochondrion | 64.93 | 65.41 |
| AT3G12260.1 | Thale cress | mitochondrion | 64.93 | 65.41 |
| CDY52615 | Canola | mitochondrion | 64.93 | 65.41 |
| HORVU2Hr1G026060.1 | Barley | cytosol | 63.43 | 65.38 |
| TraesCS2B01G172200.1 | Wheat | cytosol | 63.43 | 65.38 |
| CDX73829 | Canola | mitochondrion | 64.18 | 64.66 |
| Bra038706.1-P | Field mustard | mitochondrion | 64.18 | 64.66 |
| PGSC0003DMT400010919 | Potato | mitochondrion | 61.94 | 62.88 |
| PGSC0003DMT400013502 | Potato | cytosol | 44.03 | 62.77 |
| CDY42139 | Canola | mitochondrion | 66.42 | 62.68 |
| PGSC0003DMT400065693 | Potato | cytosol, plastid | 34.33 | 62.16 |
| CDY08442 | Canola | mitochondrion | 65.67 | 61.97 |
| Bra034766.1-P | Field mustard | mitochondrion | 65.67 | 61.97 |
| TraesCS2A01G146900.1 | Wheat | cytosol | 62.69 | 59.57 |
| CDY50561 | Canola | extracellular | 33.58 | 58.44 |
| Zm00001d027389_P001 | Maize | plastid | 35.07 | 54.65 |
| CDY50560 | Canola | cytosol, mitochondrion | 34.33 | 53.49 |
| KRH37810 | Soybean | cytosol, plastid | 39.55 | 35.33 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P09280_001 | EnsemblPlants:GSMUA_Achr3T09280_001 | EnsemblPlantsGene:GSMUA_Achr3G09280_001 | PANTHER:PTHR12964 | UniParc:UPI0002950B30 | UniProt:M0SD45 |
| MapMan:2.4.1.4.1.3 | : | : | : | : | : |
Description
Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09280_001]
Coordinates
chr3:-:6691669..6697722
Molecular Weight (calculated)
15094.4 Da
IEP (calculated)
9.473
GRAVY (calculated)
-0.151
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALAALKMV KVPPNSASVG EARKRTLEFF KMACRSLPSV MEIYNLDDVV TVSHLRSAIS AQIRKNAHIN NPKVIDLLLF KATEELSNIV THSKQRHHVI
101: GQYVLGHEGL MQDMGTKDEG ISEFLKQFYT SNYF
101: GQYVLGHEGL MQDMGTKDEG ISEFLKQFYT SNYF
001: MAAPFALRKI GVPPNSANLT EARRRVFDFF RAACRSIPTI MDIYNLQDVV APSQLRYAIS AQIRNNAHIT DPKVIDLLIF KGMEELTDIV DHAKQRHHII
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHI0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.