Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42139 | Canola | mitochondrion | 93.98 | 88.03 |
| CDY08442 | Canola | mitochondrion | 93.23 | 87.32 |
| Bra034766.1-P | Field mustard | mitochondrion | 93.23 | 87.32 |
| EES03003 | Sorghum | cytosol | 67.67 | 68.18 |
| HORVU2Hr1G026060.1 | Barley | cytosol | 66.17 | 67.69 |
| TraesCS2B01G172200.1 | Wheat | cytosol | 66.17 | 67.69 |
| KRH13331 | Soybean | mitochondrion | 65.41 | 66.41 |
| GSMUA_Achr3P09280_001 | Banana | mitochondrion | 65.41 | 64.93 |
| KRH20678 | Soybean | endoplasmic reticulum | 63.91 | 64.89 |
| VIT_13s0084g00610.t01 | Wine grape | cytosol | 63.16 | 63.16 |
| PGSC0003DMT400010919 | Potato | mitochondrion | 62.41 | 62.88 |
| TraesCS2A01G146900.1 | Wheat | cytosol | 66.17 | 62.41 |
| Solyc01g022750.2.1 | Tomato | plastid | 61.65 | 62.12 |
| PGSC0003DMT400013502 | Potato | cytosol | 43.61 | 61.7 |
| PGSC0003DMT400065693 | Potato | cytosol, plastid | 31.58 | 56.76 |
| Zm00001d027389_P001 | Maize | plastid | 36.09 | 55.81 |
| KRH37810 | Soybean | cytosol, plastid | 40.6 | 36.0 |
Protein Annotations
| MapMan:2.4.1.4.1.3 | EntrezGene:820406 | UniProt:A0A178VFH3 | ProteinID:AAG51074.1 | ProteinID:AEE75177.1 | ArrayExpress:AT3G12260 |
| EnsemblPlantsGene:AT3G12260 | RefSeq:AT3G12260 | TAIR:AT3G12260 | RefSeq:AT3G12260-TAIR-G | EnsemblPlants:AT3G12260.1 | TAIR:AT3G12260.1 |
| EMBL:AY054576 | EMBL:AY064675 | Unigene:At.48649 | ProteinID:BAB03135.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0055114 | GO:GO:0070469 | RefSeq:NP_566416.1 | ProteinID:OAP04301.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12964 | UniProt:Q9LHI0 | UniParc:UPI00000A00C9 | SEG:seg |
Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHI0]
Coordinates
chr3:-:3908940..3910475
Molecular Weight (calculated)
15083.1 Da
IEP (calculated)
9.453
GRAVY (calculated)
-0.238
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPFALRKI GVPPNSANLT EARRRVFDFF RAACRSIPTI MDIYNLQDVV APSQLRYAIS AQIRNNAHIT DPKVIDLLIF KGMEELTDIV DHAKQRHHII
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.