Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027389_P001 | Maize | plastid | 66.22 | 56.98 |
| Solyc01g022750.2.1 | Tomato | plastid | 91.89 | 51.52 |
| CDY50560 | Canola | cytosol, mitochondrion | 56.76 | 48.84 |
| PGSC0003DMT400010919 | Potato | mitochondrion | 72.97 | 40.91 |
| EES03003 | Sorghum | cytosol | 67.57 | 37.88 |
| PGSC0003DMT400013502 | Potato | cytosol | 45.95 | 36.17 |
| VIT_13s0084g00610.t01 | Wine grape | cytosol | 62.16 | 34.59 |
| GSMUA_Achr3P09280_001 | Banana | mitochondrion | 62.16 | 34.33 |
| KRH20678 | Soybean | endoplasmic reticulum | 58.11 | 32.82 |
| CDY52615 | Canola | mitochondrion | 58.11 | 32.33 |
| CDY00763 | Canola | mitochondrion | 58.11 | 32.33 |
| Bra001444.1-P | Field mustard | mitochondrion | 58.11 | 32.33 |
| KRH13331 | Soybean | mitochondrion | 56.76 | 32.06 |
| AT3G12260.1 | Thale cress | mitochondrion | 56.76 | 31.58 |
| CDX73829 | Canola | mitochondrion | 56.76 | 31.58 |
| Bra038706.1-P | Field mustard | mitochondrion | 56.76 | 31.58 |
| HORVU2Hr1G026060.1 | Barley | cytosol | 54.05 | 30.77 |
| TraesCS2B01G172200.1 | Wheat | cytosol | 54.05 | 30.77 |
| CDY42139 | Canola | mitochondrion | 58.11 | 30.28 |
| CDY08442 | Canola | mitochondrion | 58.11 | 30.28 |
| Bra034766.1-P | Field mustard | mitochondrion | 58.11 | 30.28 |
| TraesCS2A01G146900.1 | Wheat | cytosol | 54.05 | 28.37 |
| KRH37810 | Soybean | cytosol, plastid | 55.41 | 27.33 |
| CDY50561 | Canola | extracellular | 6.76 | 6.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400065693 | EnsemblPlantsGene:PGSC0003DMG401025557 | PANTHER:PTHR12964 | PGSC:PGSC0003DMG401025557 | UniParc:UPI000296C61F | UniProt:M1CEF7 |
| MapMan:2.4.1.4.1.3 | : | : | : | : | : |
Description
NADH ubiquinone oxidoreductase B14 subunit [Source:PGSC_GENE;Acc:PGSC0003DMG401025557]
Coordinates
chr11:+:7123894..7124255
Molecular Weight (calculated)
8303.1 Da
IEP (calculated)
10.047
GRAVY (calculated)
-0.207
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MSQILKSLKV PPNSASLEEA RTRTFEFFRM CCRSIPHVME VYNLHDVVSP SQLRSAAAAE VRKNANVTNP KVSI
001: MAAPFALRKI GVPPNSANLT EARRRVFDFF RAACRSIPTI MDIYNLQDVV APSQLRYAIS AQIRNNAHIT DPKVIDLLIF KGMEELTDIV DHAKQRHHII
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHI0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.