Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22065420
plastid: 23198870 mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
23198870
doi
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065693 | Potato | cytosol, plastid | 56.98 | 66.22 |
| EES03003 | Sorghum | cytosol | 84.88 | 55.3 |
| CDY50560 | Canola | cytosol, mitochondrion | 54.65 | 54.65 |
| HORVU2Hr1G026060.1 | Barley | cytosol | 68.6 | 45.38 |
| TraesCS2B01G172200.1 | Wheat | cytosol | 67.44 | 44.62 |
| TraesCS2A01G146900.1 | Wheat | cytosol | 67.44 | 41.13 |
| Solyc01g022750.2.1 | Tomato | plastid | 62.79 | 40.91 |
| CDX73829 | Canola | mitochondrion | 59.3 | 38.35 |
| Bra001444.1-P | Field mustard | mitochondrion | 58.14 | 37.59 |
| Bra038706.1-P | Field mustard | mitochondrion | 58.14 | 37.59 |
| CDY00763 | Canola | mitochondrion | 58.14 | 37.59 |
| CDY52615 | Canola | mitochondrion | 58.14 | 37.59 |
| PGSC0003DMT400010919 | Potato | mitochondrion | 56.98 | 37.12 |
| VIT_13s0084g00610.t01 | Wine grape | cytosol | 56.98 | 36.84 |
| KRH20678 | Soybean | endoplasmic reticulum | 55.81 | 36.64 |
| AT3G12260.1 | Thale cress | mitochondrion | 55.81 | 36.09 |
| KRH13331 | Soybean | mitochondrion | 54.65 | 35.88 |
| CDY42139 | Canola | mitochondrion | 58.14 | 35.21 |
| CDY08442 | Canola | mitochondrion | 58.14 | 35.21 |
| Bra034766.1-P | Field mustard | mitochondrion | 58.14 | 35.21 |
| GSMUA_Achr3P09280_001 | Banana | mitochondrion | 54.65 | 35.07 |
| KRH37810 | Soybean | cytosol, plastid | 58.14 | 33.33 |
| PGSC0003DMT400013502 | Potato | cytosol | 33.72 | 30.85 |
| CDY50561 | Canola | extracellular | 8.14 | 9.09 |
Protein Annotations
| EnsemblPlants:Zm00001d027389_P001 | EnsemblPlants:Zm00001d027389_T001 | EnsemblPlantsGene:Zm00001d027389 | PANTHER:PTHR12964 | ProteinID:ONL92990.1 | SEG:seg |
| UniParc:UPI0008442784 | UniProt:A0A1D6JLG7 | MapMan:2.4.1.4.1.3 | : | : | : |
Description
NADH ubiquinone oxidoreductase B14 subunit5
Coordinates
chr1:-:4149732..4149992
Molecular Weight (calculated)
9817.8 Da
IEP (calculated)
10.938
GRAVY (calculated)
-0.533
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MAFTMRAVKV PPNSASLEEA RHRVFDFFKQ ACRSIPTVME IYNLDDVVTP SQLRSTIAKE IRKNQNVTNP KVPSRSLSRP PSRFDP
001: MAAPFALRKI GVPPNSANLT EARRRVFDFF RAACRSIPTI MDIYNLQDVV APSQLRYAIS AQIRNNAHIT DPKVIDLLIF KGMEELTDIV DHAKQRHHII
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
101: GQYVVGEGLV QNTGNKDQGK TDFLKNFYTS NYF
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHI0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.