Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| ATMG01120.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 43.33 | 85.71 |
| Solyc10g018950.1.1 | Tomato | mitochondrion | 21.67 | 28.47 |
| CDY25241 | Canola | cytosol | 8.89 | 14.68 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_AchrUn_randomG05460_001 | EnsemblPlants:GSMUA_AchrUn_randomP05460_001 | EnsemblPlants:GSMUA_AchrUn_randomT05460_001 | UniProt:M0U6K8 | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS |
| PFAM:PF00146 | ScanProsite:PS00668 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | TMHMM:TMhelix | UniParc:UPI000296D9FE |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05460_001]
Coordinates
chrchrUn_random:-:21263726..21270026
Molecular Weight (calculated)
20577.2 Da
IEP (calculated)
9.139
GRAVY (calculated)
0.207
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIRRRDNNN KWGVLRGRAR TVHSFLILFS LWHCWELPLY SKYAFLGALR SAAQMVPYEV SIGLILIMRL ECPRLVARLL FIVMAQKQIW SGIPLFPVLV
101: MFLIPRLAET NRAPFDLPEA EAESVAGYNV EYARDAILSS SLLVEANVQG THSDFNKGWV FTNFQIPDFG IPKEWGNSSF
101: MFLIPRLAET NRAPFDLPEA EAESVAGYNV EYARDAILSS SLLVEANVQG THSDFNKGWV FTNFQIPDFG IPKEWGNSSF
1: SKYAFLGALR SAAQMVSYEV SIGLILITVL ICVGPRNSSE IVMAQKQIWS GIPLFPVLVM FLISRLAETN RAPFDLPEAE AESVAGYNVE Y
Arabidopsis Description
NAD1BNADH dehydrogenase 1B [Source:TAIR;Acc:ATMG01120]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.