Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | mitochondrion | 85.71 | 43.33 |
| Solyc10g018950.1.1 | Tomato | mitochondrion | 47.25 | 31.39 |
| CDY25241 | Canola | cytosol | 15.38 | 12.84 |
Protein Annotations
| MapMan:35.1 | ArrayExpress:ATMG01120 | EnsemblPlantsGene:ATMG01120 | RefSeq:ATMG01120 | TAIR:ATMG01120 | RefSeq:ATMG01120-TAIR-G |
| EnsemblPlants:ATMG01120.1 | TAIR:ATMG01120.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0005886 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0031966 | GO:GO:0045271 | GO:GO:0055114 | Symbol:NAD1B | InterPro:NADH_UbQ_OxRdtase_su1/FPO |
| InterPro:NADH_UbQ_OxRdtase_su1_CS | PFAM:PF00146 | ScanProsite:PS00668 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 | TMHMM:TMhelix |
| UniParc:UPI0008DB3462 | : | : | : | : | : |
Description
NAD1BNADH dehydrogenase 1B [Source:TAIR;Acc:ATMG01120]
Coordinates
chrMt:-:287917..289083
Molecular Weight (calculated)
9966.2 Da
IEP (calculated)
4.582
GRAVY (calculated)
0.546
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: SKYAFLGALR SAAQMVSYEV SIGLILITVL ICVGPRNSSE IVMAQKQIWS GIPLFPVLVM FLISRLAETN RAPFDLPEAE AESVAGYNVE Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.