Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| ATMG01120.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 12.84 | 15.38 |
| Solyc10g018950.1.1 | Tomato | mitochondrion | 12.84 | 10.22 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 14.68 | 8.89 |
| CDY45510 | Canola | cytosol, peroxisome, plastid | 9.17 | 5.21 |
Protein Annotations
| EnsemblPlants:CDY25241 | EnsemblPlantsGene:GSBRNA2T00029253001 | ProteinID:CDY25241 | ProteinID:CDY25241.1 | SEG:seg | UniParc:UPI0004EDB663 |
| UniProt:A0A078GIM7 | MapMan:35.2 | : | : | : | : |
Description
BnaC02g30170DBnaC02g30170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIM7]
Coordinates
chrLK032171:+:524725..534099
Molecular Weight (calculated)
11751.5 Da
IEP (calculated)
4.809
GRAVY (calculated)
-0.428
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSHHNPDW IDTGDNSGRG AIRSQSDPSH GSEELSDRET GESILIFNLA LSAAVGTEEA ERLDMILITR LYTSQSSIQA SSSKIIRAPG SAVSKTPSGD
101: HSFFIFDKN
101: HSFFIFDKN
001: MDRRGKYWAG PMWIGLSMCG SGSDTILECR LRLFKLQRQN QMSFVWSAAV WVIAVAAVVI SKWLYRWSNP KCNGKLPPGS MGLPIIGETC DFFEPHGLYE
101: ISPFVKKRML KYGPLFRTNI FGSNTVVLTE PDIIFEVFRQ ENKSFVFSYP EAFVKPFGKE NVFLKHGNIH KHVKQISLQH LGSEALKKKM IGEIDRVTYE
201: HLRSKANQGS FDAKEAVESV IMAHLTPKII SNLKPETQAT LVDNIMALGS EWFQSPLKLT TLISIYKVFI ARRYALQVIK DVFTRRKASR EMCGDFLDTM
301: VEEGEKEDVI FNEESAINLI FAILVVAKES TSSVTSLAIK FLAENHKALA ELKREHAAIL QNRNGKGAGV SWEEYRHQMT FTNMVINETL RMANMAPIMY
401: RKAVNDVEIK GYTIPAGWIV AVIPPAVHFN DAIYENPLEF NPWRWEGKEL RSGSKTFMVF GGGVRQCVGA EFARLQISIF IHHLVTTYDF SLAQESEFIR
501: APLPYFPKGL PIKISQSL
101: ISPFVKKRML KYGPLFRTNI FGSNTVVLTE PDIIFEVFRQ ENKSFVFSYP EAFVKPFGKE NVFLKHGNIH KHVKQISLQH LGSEALKKKM IGEIDRVTYE
201: HLRSKANQGS FDAKEAVESV IMAHLTPKII SNLKPETQAT LVDNIMALGS EWFQSPLKLT TLISIYKVFI ARRYALQVIK DVFTRRKASR EMCGDFLDTM
301: VEEGEKEDVI FNEESAINLI FAILVVAKES TSSVTSLAIK FLAENHKALA ELKREHAAIL QNRNGKGAGV SWEEYRHQMT FTNMVINETL RMANMAPIMY
401: RKAVNDVEIK GYTIPAGWIV AVIPPAVHFN DAIYENPLEF NPWRWEGKEL RSGSKTFMVF GGGVRQCVGA EFARLQISIF IHHLVTTYDF SLAQESEFIR
501: APLPYFPKGL PIKISQSL
Arabidopsis Description
CYP708A2Cytochrome P450, family 708, subfamily A, polypeptide 2 [Source:UniProtKB/TrEMBL;Acc:F4K051]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.