Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25241 | Canola | cytosol | 5.21 | 9.17 |
Protein Annotations
| MapMan:35.1 | GO:A0A078I3U8 | UniProt:A0A078I3U8 | EnsemblPlants:CDY45510 | ProteinID:CDY45510 | ProteinID:CDY45510.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00082187001 |
| InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NADH_UbQ_OxRdtase_su1_CS | PFAM:PF00146 | ScanProsite:PS00668 | PANTHER:PTHR11432 | PANTHER:PTHR11432:SF3 |
| UniParc:UPI0004EEE1AB | : | : | : | : | : |
Description
BnaCnng12690DBnaCnng12690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3U8]
Coordinates
chrLK032627:-:103458..105226
Molecular Weight (calculated)
21474.3 Da
IEP (calculated)
11.117
GRAVY (calculated)
-0.171
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLISRLAET NRAPFDLPEA EAESVAGYNV EYARDAILNS PLLAEANVPG SRGLILTETR GGSLPTQKYS IFGKTKNSSR TGLRCLMLRS KTNQWGHAGT
101: TEYALERLVI VRPGRKVFLP LSLARVAPVS GLLVTFQWLF SQSHPRKTEG KTKITIRRKQ VHKVKTLYRQ IVGSLVLLSF ESKFKAFRHG IC
101: TEYALERLVI VRPGRKVFLP LSLARVAPVS GLLVTFQWLF SQSHPRKTEG KTKITIRRKQ VHKVKTLYRQ IVGSLVLLSF ESKFKAFRHG IC
001: SSMGSALFFL GEYANMILMS GPCTLFFPGG WPPILDLPIF KKIPGSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGLLVT
101: FQWLP
101: FQWLP
Arabidopsis Description
NAD1CNADH dehydrogenase 1C [Source:TAIR;Acc:ATMG00516]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.