Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038508_P001 | Maize | mitochondrion | 98.44 | 98.44 |
| GSMUA_Achr10P... | Banana | extracellular | 84.38 | 81.82 |
| KRH40639 | Soybean | extracellular | 79.69 | 79.69 |
| KRH00516 | Soybean | extracellular | 79.69 | 79.69 |
| Os05t0481600-01 | Rice | mitochondrion | 81.25 | 78.79 |
| TraesCS1D01G302300.1 | Wheat | extracellular | 79.69 | 77.27 |
| TraesCS1A01G302900.1 | Wheat | extracellular | 79.69 | 77.27 |
| TraesCS1B01G313200.1 | Wheat | extracellular | 78.12 | 75.76 |
| PGSC0003DMT400071247 | Potato | endoplasmic reticulum, extracellular | 79.69 | 75.0 |
| Bra029702.1-P | Field mustard | endoplasmic reticulum, extracellular | 75.0 | 73.85 |
| CDY27992 | Canola | endoplasmic reticulum, extracellular | 75.0 | 73.85 |
| Bra001351.1-P | Field mustard | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| CDY66585 | Canola | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| CDY35988 | Canola | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| CDY22155 | Canola | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| CDY00662 | Canola | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| CDX73935 | Canola | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| AT3G08610.1 | Thale cress | endoplasmic reticulum, extracellular | 73.44 | 72.31 |
| VIT_11s0103g00270.t01 | Wine grape | extracellular | 73.44 | 71.21 |
| Bra040051.1-P | Field mustard | endoplasmic reticulum, extracellular | 71.88 | 70.77 |
| HORVU1Hr1G069360.1 | Barley | cytosol | 81.25 | 54.17 |
| HORVU1Hr1G069340.1 | Barley | plastid | 81.25 | 40.0 |
Protein Annotations
| EnsemblPlants:EES18401 | EnsemblPlantsGene:SORBI_3009G176000 | EntrezGene:8064148 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 | GO:GO:0016021 | InterPro:NADH_Ub_cplx-1_asu_su-1 |
| PANTHER:PTHR17098 | PFAM:PF15879 | ProteinID:EES18401 | ProteinID:EES18401.1 | RefSeq:XP_002439971.1 | SEG:seg |
| TMHMM:TMhelix | unigene:Sbi.7687 | UniParc:UPI0001A889E3 | UniProt:C5YZU8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr9:+:53106743..53109789
Molecular Weight (calculated)
7246.0 Da
IEP (calculated)
9.341
GRAVY (calculated)
-0.225
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MARLHWLEAV LPLGIIGGML CIMGNAQYFI HKAAHGRPKH IGNDMWDVAM ERRDKKLMEQ SSGN
1: MSLVWLEAML PLGIIGGMLC IMGNSQYYIH KAYHGRPKHI GHDEWDVAME RRDKKVVEKA AAPSS
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z5]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.