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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 4
  • extracellular 2
  • mitochondrion 3
  • peroxisome 1
  • cytosol 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:cytosol, mitochondrion, peroxisome, plastid
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
mitochondrion: 19010998
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os06t0107000-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G20150.1 Os06t0107000-01 AT4G25660.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P03530_001 Banana extracellular 86.42 86.42
Bra012516.1-P Field mustard mitochondrion 79.01 79.01
AT4G20150.1 Thale cress extracellular, mitochondrion 79.01 79.01
TraesCS2D01G233900.1 Wheat extracellular 85.19 78.41
TraesCS2B01G251800.1 Wheat extracellular, mitochondrion 85.19 78.41
TraesCS2A01G230200.1 Wheat extracellular, mitochondrion 85.19 78.41
CDY31451 Canola mitochondrion 77.78 77.78
CDY54560 Canola mitochondrion 77.78 77.78
CDY01636 Canola mitochondrion 76.54 76.54
CDX78977 Canola extracellular, mitochondrion 76.54 75.61
Zm00001d006421_P002 Maize extracellular, mitochondrion 90.12 75.26
HORVU2Hr1G049640.1 Barley extracellular, mitochondrion 83.95 73.91
HORVU2Hr1G051150.4 Barley extracellular, mitochondrion 83.95 73.91
CDX98657 Canola extracellular, mitochondrion 77.78 73.26
Solyc10g005230.2.1 Tomato extracellular, mitochondrion 70.37 70.37
OQU89974 Sorghum extracellular, peroxisome 86.42 69.31
Zm00001d021536_P003 Maize extracellular 85.19 69.0
KRH42439 Soybean mitochondrion, plastid 74.07 65.93
VIT_01s0010g00360.t01 Wine grape extracellular 40.74 64.71
Bra020934.1-P Field mustard extracellular, golgi, vacuole 77.78 60.58
KRH58545 Soybean extracellular, mitochondrion 75.31 56.48
PGSC0003DMT400029312 Potato mitochondrion 66.67 47.79
VIT_01s0010g03830.t01 Wine grape mitochondrion 66.67 42.86
Protein Annotations
MapMan:35.2EntrezGene:4343303ProteinID:BAC79719.1ProteinID:BAD30453.1ProteinID:BAF21623.1ProteinID:BAT01620.1
ncoils:CoilProteinID:EEE67222.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005747GO:GO:0005773GO:GO:0005774GO:GO:0016020EnsemblPlantsGene:Os07g0498300
EnsemblPlants:Os07t0498300-01PANTHER:PTHR36052UniProt:Q7XIF7UniParc:UPI00001B39E7RefSeq:XP_015645089.1SEG:seg
Description
Conserved hypothetical protein. (Os07t0498300-01);Similar to cDNA clone:001-022-F09, full insert sequence. (Os07t0498300-02)
Coordinates
chr7:+:18684478..18687752
Molecular Weight (calculated)
9349.3 Da
IEP (calculated)
5.682
GRAVY (calculated)
-0.522
Length
81 amino acids
Sequence
(BLAST)
1: MPATPTIIGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFVNQLV KWDEKLKEDL DKMLERAKQA NERRYFDDDD D
Best Arabidopsis Sequence Match ( AT4G20150.1 )
(BLAST)
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.