Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20150.1 | KRH08874 | AT4G25660.1 | 21798944 |
| AT4G20150.1 | KRH35244 | AT4G25660.1 | 21798944 |
| AT4G20150.1 | KRH38387 | AT4G25660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78977 | Canola | extracellular, mitochondrion | 67.03 | 74.39 |
| Bra012516.1-P | Field mustard | mitochondrion | 65.93 | 74.07 |
| Os07t0498300-01 | Rice | mitochondrion | 65.93 | 74.07 |
| CDY01636 | Canola | mitochondrion | 64.84 | 72.84 |
| CDY31451 | Canola | mitochondrion | 64.84 | 72.84 |
| CDY54560 | Canola | mitochondrion | 64.84 | 72.84 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 64.84 | 72.84 |
| CDX98657 | Canola | extracellular, mitochondrion | 67.03 | 70.93 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 62.64 | 70.37 |
| KRH58545 | Soybean | extracellular, mitochondrion | 82.42 | 69.44 |
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 61.54 | 69.14 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 63.74 | 65.91 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 63.74 | 65.91 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 63.74 | 65.91 |
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 36.26 | 64.71 |
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 63.74 | 63.04 |
| HORVU2Hr1G049640.1 | Barley | extracellular, mitochondrion | 63.74 | 63.04 |
| Bra020934.1-P | Field mustard | extracellular, golgi, vacuole | 67.03 | 58.65 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 61.54 | 57.73 |
| Zm00001d021536_P003 | Maize | extracellular | 62.64 | 57.0 |
| OQU89974 | Sorghum | extracellular, peroxisome | 62.64 | 56.44 |
| PGSC0003DMT400029312 | Potato | mitochondrion | 60.44 | 48.67 |
| VIT_01s0010g03830.t01 | Wine grape | mitochondrion | 62.64 | 45.24 |
Protein Annotations
| EMBL:ACUP02004804 | EnsemblPlants:KRH42439 | EnsemblPlantsGene:GLYMA_08G090100 | EntrezGene:100778929 | ncoils:Coil | PANTHER:PTHR36052 |
| ProteinID:KRH42439 | ProteinID:KRH42439.1 | UniParc:UPI00023C69F1 | UniProt:A0A0R0IJ89 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr8:-:6792714..6793785
Molecular Weight (calculated)
10196.5 Da
IEP (calculated)
9.509
GRAVY (calculated)
-0.115
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MLSATAIGAL LGLGTQMYSN ALRKLPYMRH PWEHVVGMGL GAVFVNQLLK WEAQVEQDLD KMLEKAKAAN ERRYIGSPFL FNPNYVTKDA A
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.