Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_16s0050g01050.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20150.1 | VIT_16s0050g01050.t01 | AT4G25660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 38.1 | 94.12 |
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 46.03 | 71.6 |
| Bra012516.1-P | Field mustard | mitochondrion | 45.24 | 70.37 |
| CDY31451 | Canola | mitochondrion | 44.44 | 69.14 |
| CDY54560 | Canola | mitochondrion | 44.44 | 69.14 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 44.44 | 69.14 |
| CDY01636 | Canola | mitochondrion | 43.65 | 67.9 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 43.65 | 67.9 |
| Os07t0498300-01 | Rice | mitochondrion | 42.86 | 66.67 |
| CDX78977 | Canola | extracellular, mitochondrion | 42.86 | 65.85 |
| CDX98657 | Canola | extracellular, mitochondrion | 44.44 | 65.12 |
| KRH42439 | Soybean | mitochondrion, plastid | 45.24 | 62.64 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 39.68 | 56.82 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 39.68 | 56.82 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 39.68 | 56.82 |
| KRH58545 | Soybean | extracellular, mitochondrion | 46.03 | 53.7 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 41.27 | 53.61 |
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 38.89 | 53.26 |
| HORVU2Hr1G049640.1 | Barley | extracellular, mitochondrion | 38.89 | 53.26 |
| Bra020934.1-P | Field mustard | extracellular, golgi, vacuole | 43.65 | 52.88 |
| PGSC0003DMT400029312 | Potato | mitochondrion | 45.24 | 50.44 |
| OQU89974 | Sorghum | extracellular, peroxisome | 39.68 | 49.51 |
| Zm00001d021536_P003 | Maize | extracellular | 38.89 | 49.0 |
Protein Annotations
| ArrayExpress:VIT_01s0010g03830 | EMBL:FN595754 | EnsemblPlants:VIT_01s0010g03830.t01 | EnsemblPlantsGene:VIT_01s0010g03830 | EntrezGene:100257379 | EntrezGene:LOC100257379 |
| ncoils:Coil | PANTHER:PTHR36052 | ProteinID:CCB51312 | ProteinID:CCB51312.1 | RefSeq:XP_002276698 | RefSeq:XP_002276698.1 |
| SEG:seg | UniParc:UPI000210A72C | UniProt:F6HGB9 | wikigene:100257379 | wikigene:LOC100257379 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1:-:21186425..21192801
Molecular Weight (calculated)
14303.4 Da
IEP (calculated)
10.105
GRAVY (calculated)
-0.390
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MTCAQMIGQR VRNETTQRAH WATGFKNSFL FSKKNKKYKI RLEGEMPLSA TVVGAVLGLS VQLHSNALRK LPLMRHPWEH VLAIGIGAVF GNQLVKWEAK
101: VEEDLDKLLE KAKAANERRY IDADED
101: VEEDLDKLLE KAKAANERRY IDADED
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.