Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31451 | Canola | mitochondrion | 91.46 | 92.59 |
| CDY54560 | Canola | mitochondrion | 91.46 | 92.59 |
| CDY01636 | Canola | mitochondrion | 90.24 | 91.36 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 89.02 | 90.12 |
| CDX98657 | Canola | extracellular, mitochondrion | 91.46 | 87.21 |
| Os07t0498300-01 | Rice | mitochondrion | 75.61 | 76.54 |
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 74.39 | 75.31 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 73.17 | 74.07 |
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 43.9 | 70.59 |
| KRH42439 | Soybean | mitochondrion, plastid | 74.39 | 67.03 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 70.73 | 65.91 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 70.73 | 65.91 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 70.73 | 65.91 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 73.17 | 61.86 |
| OQU89974 | Sorghum | extracellular, peroxisome | 75.61 | 61.39 |
| Zm00001d021536_P003 | Maize | extracellular | 74.39 | 61.0 |
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 67.07 | 59.78 |
| HORVU2Hr1G049640.1 | Barley | extracellular, mitochondrion | 67.07 | 59.78 |
| KRH58545 | Soybean | extracellular, mitochondrion | 73.17 | 55.56 |
| PGSC0003DMT400029312 | Potato | mitochondrion | 73.17 | 53.1 |
| VIT_01s0010g03830.t01 | Wine grape | mitochondrion | 65.85 | 42.86 |
Protein Annotations
| EnsemblPlants:CDX78977 | EnsemblPlantsGene:GSBRNA2T00131489001 | PANTHER:PTHR36052 | ProteinID:CDX78977 | ProteinID:CDX78977.1 | UniParc:UPI0004EE6963 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g10440D
Coordinates
chrLK031816:-:1165345..1167049
Molecular Weight (calculated)
9289.7 Da
IEP (calculated)
9.686
GRAVY (calculated)
0.115
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MPLSATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL EVMLNKARAA NERRYFGMFC LC
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.