Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54560 | Canola | mitochondrion | 100.0 | 100.0 |
| CDY01636 | Canola | mitochondrion | 98.77 | 98.77 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 96.3 | 96.3 |
| CDX78977 | Canola | extracellular, mitochondrion | 92.59 | 91.46 |
| CDX98657 | Canola | extracellular, mitochondrion | 91.36 | 86.05 |
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 80.25 | 80.25 |
| Os07t0498300-01 | Rice | mitochondrion | 77.78 | 77.78 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 76.54 | 76.54 |
| Bra020934.1-P | Field mustard | extracellular, golgi, vacuole | 92.59 | 72.12 |
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 44.44 | 70.59 |
| KRH42439 | Soybean | mitochondrion, plastid | 72.84 | 64.84 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 69.14 | 63.64 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 69.14 | 63.64 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 69.14 | 63.64 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 75.31 | 62.89 |
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 69.14 | 60.87 |
| HORVU2Hr1G049640.1 | Barley | extracellular, mitochondrion | 69.14 | 60.87 |
| OQU89974 | Sorghum | extracellular, peroxisome | 74.07 | 59.41 |
| Zm00001d021536_P003 | Maize | extracellular | 72.84 | 59.0 |
| KRH58545 | Soybean | extracellular, mitochondrion | 72.84 | 54.63 |
| PGSC0003DMT400029312 | Potato | mitochondrion | 75.31 | 53.98 |
| VIT_01s0010g03830.t01 | Wine grape | mitochondrion | 69.14 | 44.44 |
Protein Annotations
| EnsemblPlants:CDY31451 | EnsemblPlantsGene:GSBRNA2T00047697001 | PANTHER:PTHR36052 | ProteinID:CDY31451 | ProteinID:CDY31451.1 | ProteinID:CDY54560.1 |
| UniParc:UPI0004EC9318 | UniProt:A0A078IYZ3 | MapMan:35.2 | : | : | : |
Description
BnaC03g63730DBnaA08g30400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYZ3]
Coordinates
chrLK032272:+:337729..339072
Molecular Weight (calculated)
9266.3 Da
IEP (calculated)
7.687
GRAVY (calculated)
-0.274
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MPLSATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL EVMLDKARAA NERRYFDEDR D
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.