Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU7Hr1G002080.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20150.1 | HORVU7Hr1G002080.2 | AT4G25660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 100.0 | 100.0 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 81.52 | 85.23 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 81.52 | 85.23 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 81.52 | 85.23 |
| Os07t0498300-01 | Rice | mitochondrion | 73.91 | 83.95 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 67.39 | 76.54 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 75.0 | 71.13 |
| Bra012516.1-P | Field mustard | mitochondrion | 61.96 | 70.37 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 61.96 | 70.37 |
| Zm00001d021536_P003 | Maize | extracellular | 76.09 | 70.0 |
| OQU89974 | Sorghum | extracellular, peroxisome | 76.09 | 69.31 |
| CDY54560 | Canola | mitochondrion | 60.87 | 69.14 |
| CDY31451 | Canola | mitochondrion | 60.87 | 69.14 |
| CDY01636 | Canola | mitochondrion | 59.78 | 67.9 |
| CDX78977 | Canola | extracellular, mitochondrion | 59.78 | 67.07 |
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 58.7 | 66.67 |
| CDX98657 | Canola | extracellular, mitochondrion | 61.96 | 66.28 |
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 35.87 | 64.71 |
| KRH42439 | Soybean | mitochondrion, plastid | 63.04 | 63.74 |
| Bra020934.1-P | Field mustard | extracellular, golgi, vacuole | 60.87 | 53.85 |
| KRH58545 | Soybean | extracellular, mitochondrion | 61.96 | 52.78 |
| PGSC0003DMT400029312 | Potato | mitochondrion | 59.78 | 48.67 |
| VIT_01s0010g03830.t01 | Wine grape | mitochondrion | 53.26 | 38.89 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G049640.1 | EnsemblPlantsGene:HORVU2Hr1G049640 | PANTHER:PTHR36052 | UniParc:UPI000B46A9A3 | UniProt:A0A287HZP7 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr2H:-:283719899..283720890
Molecular Weight (calculated)
10628.1 Da
IEP (calculated)
9.037
GRAVY (calculated)
-0.118
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MPATPTIIGA LLGLGTQMYS NALRKLPYMR HPWEHVLGMG LGVVFVNQLV KFDEKVKVDL DKMLERAKHA NEQRTFFNTD PWYYFCVMGT SY
001: MPVSEIMAGA ALGLALQVLH DAIKKAKDRS LTTRCILDRL DATIFRITPL VTQVDKLSEE VEDSPRKVIE DLKHLLEKAV SLVEAYAELR RRNLLKKFRY
101: KRRIKELEAS LRWMVDVDVQ VNQWVDIKEL MAKMSEMNTK LDEITRQPTD CICFKSNHST SQSSSQNIVE ETDRSLEEIV ECSSDGSKPK IDIHIHWSSR
201: KRNKDREIRF VLK
101: KRRIKELEAS LRWMVDVDVQ VNQWVDIKEL MAKMSEMNTK LDEITRQPTD CICFKSNHST SQSSSQNIVE ETDRSLEEIV ECSSDGSKPK IDIHIHWSSR
201: KRNKDREIRF VLK
Arabidopsis Description
HR3MLA10 [Source:UniProtKB/TrEMBL;Acc:A0A178VJG9]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.