Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 4
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400018924 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20150.1 | PGSC0003DMT400018924 | AT4G25660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005230.2.1 | Tomato | extracellular, mitochondrion | 66.37 | 92.59 |
| Bra012516.1-P | Field mustard | mitochondrion | 54.87 | 76.54 |
| CDY31451 | Canola | mitochondrion | 53.98 | 75.31 |
| CDY54560 | Canola | mitochondrion | 53.98 | 75.31 |
| AT4G20150.1 | Thale cress | extracellular, mitochondrion | 53.98 | 75.31 |
| CDX98657 | Canola | extracellular, mitochondrion | 56.64 | 74.42 |
| CDY01636 | Canola | mitochondrion | 53.1 | 74.07 |
| CDX78977 | Canola | extracellular, mitochondrion | 53.1 | 73.17 |
| VIT_01s0010g00360.t01 | Wine grape | extracellular | 30.09 | 66.67 |
| Os07t0498300-01 | Rice | mitochondrion | 47.79 | 66.67 |
| GSMUA_Achr8P03530_001 | Banana | extracellular | 46.02 | 64.2 |
| TraesCS2D01G233900.1 | Wheat | extracellular | 47.79 | 61.36 |
| TraesCS2B01G251800.1 | Wheat | extracellular, mitochondrion | 47.79 | 61.36 |
| TraesCS2A01G230200.1 | Wheat | extracellular, mitochondrion | 47.79 | 61.36 |
| KRH42439 | Soybean | mitochondrion, plastid | 48.67 | 60.44 |
| HORVU2Hr1G051150.4 | Barley | extracellular, mitochondrion | 48.67 | 59.78 |
| HORVU2Hr1G049640.1 | Barley | extracellular, mitochondrion | 48.67 | 59.78 |
| Bra020934.1-P | Field mustard | extracellular, golgi, vacuole | 53.98 | 58.65 |
| Zm00001d021536_P003 | Maize | extracellular | 50.44 | 57.0 |
| Zm00001d006421_P002 | Maize | extracellular, mitochondrion | 48.67 | 56.7 |
| OQU89974 | Sorghum | extracellular, peroxisome | 49.56 | 55.45 |
| KRH58545 | Soybean | extracellular, mitochondrion | 49.56 | 51.85 |
| VIT_01s0010g03830.t01 | Wine grape | mitochondrion | 50.44 | 45.24 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029312 | EnsemblPlantsGene:PGSC0003DMG400011262 | EntrezGene:102598741 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0016020 |
| PANTHER:PTHR36052 | PGSC:PGSC0003DMG400011262 | UniParc:UPI000294839C | UniProt:M1ASK6 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011262]
Coordinates
chr10:-:245159..246956
Molecular Weight (calculated)
13033.8 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.403
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSATMVGA LLGLGTQMYS NALRKLPYMR HPWEHLLGIG LGVVAANQMV KWEAKSNEDL DKLLEKSRLA NERRYFEALF GQNYYSYTHG KRDDQSRLHL
101: FHTSPQIPHL HIL
101: FHTSPQIPHL HIL
1: MPISATMVGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFANQLV KWDVKLKEDL DVMLAKARAA NERRYFDEDR D
Arabidopsis Description
Excitatory amino acid transporter [Source:UniProtKB/TrEMBL;Acc:Q94AL6]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.